RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 OMGP23515 440 aa20.87■□□□□ 0.93
SSBP3-202ENST00000357475 GDNFP39905 211 aa20.87■□□□□ 0.93
SSBP3-202ENST00000357475 PITPNAQ00169 270 aa20.87■□□□□ 0.93
SSBP3-202ENST00000357475 PRB3Q04118 309 aaPredicted RBP20.87■□□□□ 0.93
SSBP3-202ENST00000357475 CR1LQ2VPA4 569 aa20.87■□□□□ 0.93
SSBP3-202ENST00000357475 FAM53AQ6NSI3 398 aaPredicted RBP20.87■□□□□ 0.93
SSBP3-202ENST00000357475 SPNS3Q6ZMD2 512 aa20.87■□□□□ 0.93
SSBP3-202ENST00000357475 C11orf42Q8N5U0 333 aa20.87■□□□□ 0.93
SSBP3-202ENST00000357475 RIMS4Q9H426 269 aaPredicted RBP20.87■□□□□ 0.93
SSBP3-202ENST00000357475 ONECUT1Q9UBC0 465 aa20.87■□□□□ 0.93
SSBP3-202ENST00000357475 UBE2J1Q9Y385 318 aaPredicted RBP20.87■□□□□ 0.93
SSBP3-202ENST00000357475 INSIG2Q9Y5U4 225 aa20.87■□□□□ 0.93
SSBP3-202ENST00000357475 LIPFP07098 398 aa20.86■□□□□ 0.93
SSBP3-202ENST00000357475 INHBBP09529 407 aa20.86■□□□□ 0.93
SSBP3-202ENST00000357475 ARF6P62330 175 aa20.86■□□□□ 0.93
SSBP3-202ENST00000357475 KRTAP1-1Q07627 177 aa20.86■□□□□ 0.93
SSBP3-202ENST00000357475 PYDC2Q56P42 97 aa20.86■□□□□ 0.93
SSBP3-202ENST00000357475 UTF1Q5T230 341 aa20.86■□□□□ 0.93
SSBP3-202ENST00000357475 PRR18Q8N4B5 295 aa20.86■□□□□ 0.93
SSBP3-202ENST00000357475 RFESDQ8TAC1 157 aa20.86■□□□□ 0.93
SSBP3-202ENST00000357475 ZNF714Q96N38 554 aa20.86■□□□□ 0.93
SSBP3-202ENST00000357475 SDHCQ99643 169 aaPredicted RBP20.86■□□□□ 0.93
SSBP3-202ENST00000357475 OCSTAMPQ9BR26 566 aa20.86■□□□□ 0.93
SSBP3-202ENST00000357475 SRRQ9GZT4 340 aa20.86■□□□□ 0.93
SSBP3-202ENST00000357475 TAF9BQ9HBM6 251 aa20.86■□□□□ 0.93
SSBP3-202ENST00000357475 HIF1ANQ9NWT6 349 aa20.86■□□□□ 0.93
SSBP3-202ENST00000357475 KLK11Q9UBX7 282 aa20.86■□□□□ 0.93
SSBP3-202ENST00000357475 LANCL1O43813 399 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 TPPPO94811 219 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 TGFAP01135 160 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 LPLP06858 475 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 ZNF728P0DKX0 622 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 DTYMKP23919 212 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 GZMKP49863 264 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 C11orf91Q3C1V1 193 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 OR52W1Q6IF63 320 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 LINC00299Q6ZSB3 139 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 Q8N7P7 452 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 ZNF565Q8N9K5 539 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 OR1L1Q8NH94 360 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 SNAPC3Q92966 411 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 TMEM186Q96B77 213 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 CALYQ9NYX4 217 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 LPAR3Q9UBY5 353 aa20.85■□□□□ 0.93
SSBP3-202ENST00000357475 CTDSPLO15194 276 aa20.84■□□□□ 0.93
SSBP3-202ENST00000357475 SCTP09683 121 aa20.84■□□□□ 0.93
SSBP3-202ENST00000357475 DVL1P1P54792 670 aaPredicted RBP20.84■□□□□ 0.93
SSBP3-202ENST00000357475 LSAMPQ13449 338 aa20.84■□□□□ 0.93
SSBP3-202ENST00000357475 HMGN3Q15651 99 aa20.84■□□□□ 0.93
SSBP3-202ENST00000357475 LTC4SQ16873 150 aa20.84■□□□□ 0.93
SSBP3-202ENST00000357475 PRAMEF5Q5TYX0 476 aa20.84■□□□□ 0.93
SSBP3-202ENST00000357475 SMIM4Q8WVI0 70 aa20.84■□□□□ 0.93
SSBP3-202ENST00000357475 ARL11Q969Q4 196 aa20.84■□□□□ 0.93
SSBP3-202ENST00000357475 KBTBD11-OT1A0A1B0GTJ5 212 aa20.83■□□□□ 0.93
SSBP3-202ENST00000357475 GABARAPH6UMI1 98 aa20.83■□□□□ 0.93
SSBP3-202ENST00000357475 GSTT2P0CG29 244 aa20.83■□□□□ 0.93
SSBP3-202ENST00000357475 GSTT2BP0CG30 244 aa20.83■□□□□ 0.93
SSBP3-202ENST00000357475 HOGA1Q86XE5 327 aa20.83■□□□□ 0.93
SSBP3-202ENST00000357475 FCAMRQ8WWV6 532 aa20.83■□□□□ 0.93
SSBP3-202ENST00000357475 SMR3AQ99954 134 aa20.83■□□□□ 0.93
SSBP3-202ENST00000357475 SCPEP1Q9HB40 452 aa20.83■□□□□ 0.93
SSBP3-202ENST00000357475 ANAPC10Q9UM13 185 aa20.83■□□□□ 0.93
SSBP3-202ENST00000357475 CSPG4Q6UVK1 2322 aa20.83■□□□□ 0.92
SSBP3-202ENST00000357475 ZNF729A6NN14 1252 aaPredicted RBP20.83■□□□□ 0.92
SSBP3-202ENST00000357475 HBZP02008 142 aa20.83■□□□□ 0.92
SSBP3-202ENST00000357475 HLA-DRB3P79483 266 aa20.83■□□□□ 0.92
SSBP3-202ENST00000357475 C6orf183Q5T699 404 aa20.83■□□□□ 0.92
SSBP3-202ENST00000357475 CYB5R2Q6BCY4 276 aa20.83■□□□□ 0.92
SSBP3-202ENST00000357475 MOB1BQ7L9L4 216 aa20.83■□□□□ 0.92
SSBP3-202ENST00000357475 TAS2R3Q9NYW6 316 aa20.83■□□□□ 0.92
SSBP3-202ENST00000357475 HIVEP1P15822 2718 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 TRAV20A0A0B4J274 112 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 IGKV1-6A0A0C4DH72 117 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 C17orf98A8MV24 154 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 NPIPB11E5RHQ5 1161 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 SULT1C2O00338 296 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 GZMHP20718 246 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 PTBP1P26599 531 aaKnown RBP eCLIP20.82■□□□□ 0.921e-6■■■■□ 23.1
SSBP3-202ENST00000357475 ZNF45Q02386 682 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 PAX8Q06710 450 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 HERPUD1Q15011 391 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 DCAF12L2Q5VW00 463 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 C15orf40Q8WUR7 153 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 KIRREL1Q96J84 757 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 C18orf12Q96KH6 178 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 SIRPDQ9H106 197 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 IFT46Q9NQC8 304 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 RABL2AQ9UBK7 228 aaPredicted RBP20.82■□□□□ 0.92
SSBP3-202ENST00000357475 MTFP1Q9UDX5 166 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 RABL2BQ9UNT1 228 aa20.82■□□□□ 0.92
SSBP3-202ENST00000357475 FAM172BPA6NC97 362 aa20.81■□□□□ 0.92
SSBP3-202ENST00000357475 TRDCB7Z8K6 153 aa20.81■□□□□ 0.92
SSBP3-202ENST00000357475 GSTZ1O43708 216 aaPredicted RBP20.81■□□□□ 0.92
SSBP3-202ENST00000357475 ORC5O43913 435 aa20.81■□□□□ 0.92
SSBP3-202ENST00000357475 BAK1Q16611 211 aa20.81■□□□□ 0.92
SSBP3-202ENST00000357475 BTNL3Q6UXE8 466 aa20.81■□□□□ 0.92
SSBP3-202ENST00000357475 ZNF782Q6ZMW2 699 aaPredicted RBP20.81■□□□□ 0.92
SSBP3-202ENST00000357475 GLCCI1Q86VQ1 547 aa20.81■□□□□ 0.92
SSBP3-202ENST00000357475 LYSMD2Q8IV50 215 aa20.81■□□□□ 0.92
SSBP3-202ENST00000357475 Q8N402 240 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms