RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 TSPAN2O60636 221 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 TTRP02766 147 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 PGA4P0DJD7 388 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 PGA5P0DJD9 388 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 PTTG1IPP53801 180 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 EWSR1Q01844 656 aaKnown RBP eCLIP10.28□□□□□ -0.76
COL9A1-202ENST00000357250 FOXC1Q12948 553 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 SEZ6L2Q6UXD5 910 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 OR2M7Q8NG81 312 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 UBALD1Q8TB05 177 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 CCL17Q92583 94 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 TXNDC17Q9BRA2 123 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 NARFLQ9H6Q4 476 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 RNF122Q9H9V4 155 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 LOC285556D6RIA3 1793 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 SH2D7A6NKC9 451 aaPredicted RBP10.28□□□□□ -0.76
COL9A1-202ENST00000357250 HOXB1P14653 301 aaPredicted RBP10.28□□□□□ -0.76
COL9A1-202ENST00000357250 ASCL1P50553 236 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 UBE2L3P68036 154 aaKnown RBP10.28□□□□□ -0.76
COL9A1-202ENST00000357250 SERF2P84101 59 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 PDPNQ86YL7 162 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 OR52L2PQ8NGH6 319 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 OR10G8Q8NGN5 311 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 OR1L1Q8NH94 360 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 TRMT61AQ96FX7 289 aaKnown RBP10.28□□□□□ -0.76
COL9A1-202ENST00000357250 PARD6AQ9NPB6 346 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 ANK1P16157 1881 aa10.28□□□□□ -0.76
COL9A1-202ENST00000357250 IGKV1-8A0A0C4DH67 115 aa10.27□□□□□ -0.76
COL9A1-202ENST00000357250 CTXND1A0A1B0GTU2 59 aa10.27□□□□□ -0.76
COL9A1-202ENST00000357250 C1orf100Q5SVJ3 147 aa10.27□□□□□ -0.76
COL9A1-202ENST00000357250 TOMM20LQ6UXN7 152 aa10.27□□□□□ -0.76
COL9A1-202ENST00000357250 SLC35E3Q7Z769 313 aa10.27□□□□□ -0.76
COL9A1-202ENST00000357250 CA5BP1Q8WTZ4 195 aa10.27□□□□□ -0.76
COL9A1-202ENST00000357250 MRPL24Q96A35 216 aaKnown RBP10.27□□□□□ -0.76
COL9A1-202ENST00000357250 TMEM204Q9BSN7 226 aa10.27□□□□□ -0.76
COL9A1-202ENST00000357250 PRSS50Q9UI38 385 aa10.27□□□□□ -0.76
COL9A1-202ENST00000357250 POLEQ07864 2286 aa10.27□□□□□ -0.76
COL9A1-202ENST00000357250 PPIHO43447 177 aaKnown RBP10.27□□□□□ -0.77
COL9A1-202ENST00000357250 CCL4P13236 92 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 SNRPEP62304 92 aaKnown RBP10.27□□□□□ -0.77
COL9A1-202ENST00000357250 KHDC3LQ587J8 217 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 AWAT1Q58HT5 328 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 DCAF10Q5QP82 559 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 PERPQ96FX8 193 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 DIRC2Q96SL1 478 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 HEXA-AS1Q9H8Q6 139 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 SCN5AQ14524 2016 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 K7ESF4 209 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 BCL3P20749 454 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 KIR3DL2P43630 455 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 RBM11P57052 281 aaKnown RBP10.27□□□□□ -0.77
COL9A1-202ENST00000357250 ZNF154Q13106 437 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 DHRS7BQ6IAN0 325 aaPredicted RBP10.27□□□□□ -0.77
COL9A1-202ENST00000357250 SLC25A40Q8TBP6 338 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 ADAT3Q96EY9 351 aaPredicted RBP10.27□□□□□ -0.77
COL9A1-202ENST00000357250 CCL28Q9NRJ3 127 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 ELF5Q9UKW6 265 aaPredicted RBP10.27□□□□□ -0.77
COL9A1-202ENST00000357250 PMCHP20382 165 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 MAGEA5P43359 124 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 AMTP48728 403 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 GHITMQ9H3K2 345 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 PRDM6Q9NQX0 595 aa10.27□□□□□ -0.77
COL9A1-202ENST00000357250 MRPL22Q9NWU5 206 aaKnown RBP10.27□□□□□ -0.77
COL9A1-202ENST00000357250 DOCK8Q8NF50 2099 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 A0A1W2PR80 420 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 NPIPB13A6NJU9 1138 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 CDRT15L2A8MXV6 281 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 NPIPB4C9JG80 1138 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 CDIPTO14735 213 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 CRIPAKQ8N1N5 446 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 CENPVL1A0A0U1RR11 272 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 C11orf94C9JXX5 98 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 OR4A8P0C604 315 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 CCL2P13500 99 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 HTR1DP28221 377 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 LOXL4Q96JB6 756 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 LIPGQ9Y5X9 500 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 IGHV3-43A0A0B4J1X8 118 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 OR2T8A6NH00 312 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 M0R296 226 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 PITX3O75364 302 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 DEDDO75618 318 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 SMIM6P0DI80 62 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 IGHV3-43DP0DP04 118 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 NANOS3P60323 173 aaKnown RBP10.26□□□□□ -0.77
COL9A1-202ENST00000357250 GTF2H5Q6ZYL4 71 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 OR8B3Q8NGG8 313 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 MARS2Q96GW9 593 aaKnown RBP10.26□□□□□ -0.77
COL9A1-202ENST00000357250 OR8B2Q96RD0 313 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 KCNK15Q9H427 330 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 CBY1Q9Y3M2 126 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 C3orf80F5H4A9 247 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 GOSR1O95249 250 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 IGKV1D-16P01601 117 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 ORM1P02763 201 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 H1FOOQ8IZA3 346 aaPredicted RBP10.26□□□□□ -0.77
COL9A1-202ENST00000357250 SLC22A18ASQ8N1D0 253 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 PRSS3P2Q8NHM4 247 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 RND1Q92730 232 aa10.26□□□□□ -0.77
COL9A1-202ENST00000357250 CHRNA10Q9GZZ6 450 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms