RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 C8orf82Q6P1X6 216 aaPredicted RBP10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 ZNF707Q96C28 371 aaPredicted RBP10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 HIST1H1EP10412 219 aaKnown RBP10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 PRSS8Q16651 343 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 SPANXN1Q5VSR9 72 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 GUSBP11Q6P575 273 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 MIXL1Q9H2W2 232 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 CES1P1Q9UKY3 287 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 TMSB15BA0A087X1C1 80 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 IGSF23A1L1A6 192 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 CD3EP07766 207 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 MMP16P51512 607 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 PLP1P60201 277 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 TIMP4Q99727 224 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 DDA1Q9BW61 102 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 MRPS18AQ9NVS2 196 aaKnown RBP10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 OR6C3Q9NZP0 311 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 FUT9Q9Y231 359 aa10.17□□□□□ -0.78
SPTBN1-202ENST00000356805 ERVH48-1M5A8F1 160 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 PTPMT1Q8WUK0 201 aaPredicted RBP10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 LRRC61Q9BV99 259 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 STAG3L3P0CL85 134 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 AMMECR1LQ6DCA0 310 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 TP53I13Q8NBR0 393 aaPredicted RBP10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 STXBP6Q8NFX7 210 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 PPP1R3EQ9H7J1 279 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 ZFP30Q9Y2G7 519 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 MOB4Q9Y3A3 225 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 FOCADQ5VW36 1801 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 HSPB1P04792 205 aaKnown RBP10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 ID1P41134 155 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 OR8I2Q8N0Y5 310 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 TRAV38-1A0A0B4J264 116 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 OR4P4Q8NGL7 312 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 OR10D3Q8NH80 312 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 P2RX4Q99571 388 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 PI4KAP42356 2102 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 HPXP02790 462 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 FCARP24071 287 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 KIR3DL2P43630 455 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 WNT3P56703 355 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 SSMEM1Q8WWF3 244 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 ADAT3Q96EY9 351 aaPredicted RBP10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 ADAP1O75689 374 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 ZNF137PP52743 207 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 ZNF385CQ66K41 422 aaPredicted RBP10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 PERPQ96FX8 193 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 MS4A4AQ96JQ5 239 aa10.16□□□□□ -0.78
SPTBN1-202ENST00000356805 A0A0A6YYD5 115 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 A0A1W2PPC4 97 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 HYAL3O43820 417 aaPredicted RBP10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 CGB1A6NKQ9 187 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 LINC01387J3KSC0 135 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 CD226Q15762 336 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 WDR38Q5JTN6 314 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 ZNF793Q6ZN11 406 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 OR4S2Q8NH73 311 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 ZG16BQ96DA0 208 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 PRDM14Q9GZV8 571 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 CTXND1A0A1B0GTU2 59 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 CDKN2AP42771 156 aaKnown RBP10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 ROM1Q03395 351 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 GABRA6Q16445 453 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 SNRNP40Q96DI7 357 aaKnown RBP10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 IGHV3OR15-7A0A075B7D8 119 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 PDCD6O75340 191 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 APCSP02743 223 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 TFPI2P48307 235 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 PRSS12P56730 875 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 PLPPR5Q32ZL2 321 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 SAP30LQ9HAJ7 183 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 TECRQ9NZ01 308 aaKnown RBP10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 INSIG2Q9Y5U4 225 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 ETHE1O95571 254 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 IGLV3-27P01718 113 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 ZNF32P17041 273 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 RELBQ01201 579 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 ANKRD55Q3KP44 614 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 PSMG4Q5JS54 123 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 NUP37Q8NFH4 326 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 FAM222BQ8WU58 562 aa10.15□□□□□ -0.78
SPTBN1-202ENST00000356805 HLA-DQB1P01920 261 aa10.15□□□□□ -0.79
SPTBN1-202ENST00000356805 WNT5AP41221 380 aa10.15□□□□□ -0.79
SPTBN1-202ENST00000356805 FZD5Q13467 585 aa10.15□□□□□ -0.79
SPTBN1-202ENST00000356805 ZNF770Q6IQ21 691 aaPredicted RBP10.15□□□□□ -0.79
SPTBN1-202ENST00000356805 C16orf82Q7Z2V1 217 aa10.15□□□□□ -0.79
SPTBN1-202ENST00000356805 Q8WTZ3 238 aa10.15□□□□□ -0.79
SPTBN1-202ENST00000356805 PMCHL2Q9BQD1 86 aa10.15□□□□□ -0.79
SPTBN1-202ENST00000356805 MS4A7Q9GZW8 240 aaPredicted RBP10.15□□□□□ -0.79
SPTBN1-202ENST00000356805 BCL2P10415 239 aa10.15□□□□□ -0.79
SPTBN1-202ENST00000356805 CCR2P41597 374 aa10.15□□□□□ -0.79
SPTBN1-202ENST00000356805 EPPINO95925 133 aa10.14□□□□□ -0.79
SPTBN1-202ENST00000356805 ZNF729A6NN14 1252 aaPredicted RBP10.14□□□□□ -0.79
SPTBN1-202ENST00000356805 AGFG2O95081 481 aa10.14□□□□□ -0.79
SPTBN1-202ENST00000356805 NUDT3O95989 172 aa10.14□□□□□ -0.79
SPTBN1-202ENST00000356805 HERPUD1Q15011 391 aa10.14□□□□□ -0.79
SPTBN1-202ENST00000356805 ZNF600Q6ZNG1 722 aa10.14□□□□□ -0.79
SPTBN1-202ENST00000356805 PUSL1Q8N0Z8 303 aaKnown RBP10.14□□□□□ -0.79
SPTBN1-202ENST00000356805 NT5CQ8TCD5 201 aa10.14□□□□□ -0.79
SPTBN1-202ENST00000356805 VN1R17PQ8TDU5 208 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms