RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ZNF221Q9UK13 617 aa15.12■□□□□ 0.01
SMARCD3-202ENST00000356800 MGAT4AQ9UM21 535 aa15.12■□□□□ 0.01
SMARCD3-202ENST00000356800 HELZ2Q9BYK8 2649 aaKnown RBP15.11■□□□□ 0.01
SMARCD3-202ENST00000356800 TMEM30CPA0ZSE6 113 aa15.11■□□□□ 0.01
SMARCD3-202ENST00000356800 CCNKO75909 580 aa15.11■□□□□ 0.01
SMARCD3-202ENST00000356800 TK1P04183 234 aa15.11■□□□□ 0.01
SMARCD3-202ENST00000356800 DAOP14920 347 aa15.11■□□□□ 0.01
SMARCD3-202ENST00000356800 GLIPR1P48060 266 aa15.11■□□□□ 0.01
SMARCD3-202ENST00000356800 CBX3Q13185 183 aa15.11■□□□□ 0.01
SMARCD3-202ENST00000356800 SURF2Q15527 256 aaPredicted RBP15.11■□□□□ 0.01
SMARCD3-202ENST00000356800 CD276Q5ZPR3 534 aa15.11■□□□□ 0.01
SMARCD3-202ENST00000356800 PEG10Q86TG7 708 aaKnown RBP15.11■□□□□ 0.01
SMARCD3-202ENST00000356800 TPRX1Q8N7U7 411 aa15.11■□□□□ 0.01
SMARCD3-202ENST00000356800 ZNF665Q9H7R5 613 aa15.11■□□□□ 0.01
SMARCD3-202ENST00000356800 SIGLEC5O15389 551 aa15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 FABP7O15540 132 aa15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 FCN3O75636 299 aa15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 HNRNPCP07910 306 aaKnown RBP eCLIP15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 SCTP09683 121 aa15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 CD300CQ08708 224 aa15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 KRBOX4Q5JUW0 171 aa15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 ZNF626Q68DY1 528 aa15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 FAHD2BQ6P2I3 314 aaPredicted RBP15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 SLC25A42Q86VD7 318 aa15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 MARCH1Q8TCQ1 289 aa15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 FAHD2AQ96GK7 314 aa15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 TMEM246Q9BRR3 403 aa15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 ZNF2Q9BSG1 426 aaPredicted RBP15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 MED28Q9H204 178 aa15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 MBNL3Q9NUK0 354 aaKnown RBP15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 GPR132Q9UNW8 380 aa15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 DOPEY2Q9Y3R5 2298 aa15.1■□□□□ 0.01
SMARCD3-202ENST00000356800 MGST3O14880 152 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 CREBL2O60519 120 aaPredicted RBP15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 CTXN2P0C2S0 81 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 OR4E1P0C645 316 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 FPR2P25090 351 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 NPY4RP50391 375 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 EDDM3AQ14507 147 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 IGSF11Q5DX21 431 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 LYPD2Q6UXB3 125 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 TMED4Q7Z7H5 227 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 FGFRL1Q8N441 504 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 DACT3Q96B18 629 aaPredicted RBP15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 SEC22CQ9BRL7 303 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 DNTTIP1Q9H147 329 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 LIME1Q9H400 295 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 TRAPPC2LQ9UL33 140 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 TACC2O95359 2948 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 IGKV1-6A0A0C4DH72 117 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 OR5H14A6NHG9 310 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 NKX6-3A6NJ46 265 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 TMPRSS2O15393 492 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 F12P00748 615 aaPredicted RBP15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 IGHV2-70P01814 119 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 IL13RA1P78552 427 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 HLA-DRB3P79483 266 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 HERPUD1Q15011 391 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 TMEM185AQ8NFB2 350 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 OR4A4PQ8NGN8 299 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 PPP1R35Q8TAP8 253 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 ST6GAL2Q96JF0 529 aa15.09■□□□□ 0.01
SMARCD3-202ENST00000356800 MEIKINA0A087WXM9 373 aa15.08■□□□□ 0
SMARCD3-202ENST00000356800 FSTL3O95633 263 aa15.08■□□□□ 0
SMARCD3-202ENST00000356800 GLP1RP43220 463 aa15.08■□□□□ 0
SMARCD3-202ENST00000356800 EFNA4P52798 201 aa15.08■□□□□ 0
SMARCD3-202ENST00000356800 C4orf46Q504U0 113 aa15.08■□□□□ 0
SMARCD3-202ENST00000356800 CAPSLQ8WWF8 208 aa15.08■□□□□ 0
SMARCD3-202ENST00000356800 DCTN5Q9BTE1 182 aa15.08■□□□□ 0
SMARCD3-202ENST00000356800 FAM234AQ9H0X4 552 aa15.08■□□□□ 0
SMARCD3-202ENST00000356800 C5orf66Q9H5L9 145 aa15.08■□□□□ 0
SMARCD3-202ENST00000356800 CTSZQ9UBR2 303 aa15.08■□□□□ 0
SMARCD3-202ENST00000356800 FBN2P35556 2912 aa15.07■□□□□ 0
SMARCD3-202ENST00000356800 SSNA1O43805 119 aa15.07■□□□□ 0
SMARCD3-202ENST00000356800 DIRAS3O95661 229 aa15.07■□□□□ 0
SMARCD3-202ENST00000356800 FCGR2CP31995 323 aa15.07■□□□□ 0
SMARCD3-202ENST00000356800 P2RX3P56373 397 aa15.07■□□□□ 0
SMARCD3-202ENST00000356800 TAS2R31P59538 309 aa15.07■□□□□ 0
SMARCD3-202ENST00000356800 UBE2MP61081 183 aaKnown RBP15.07■□□□□ 0
SMARCD3-202ENST00000356800 HMGN3Q15651 99 aa15.07■□□□□ 0
SMARCD3-202ENST00000356800 AVPI1Q5T686 147 aa15.07■□□□□ 0
SMARCD3-202ENST00000356800 OR5D13Q8NGL4 314 aa15.07■□□□□ 0
SMARCD3-202ENST00000356800 OR13A1Q8NGR1 328 aa15.07■□□□□ 0
SMARCD3-202ENST00000356800 CABLES2Q9BTV7 478 aa15.07■□□□□ 0
SMARCD3-202ENST00000356800 ZNF69Q9UC07 566 aa15.07■□□□□ 0
SMARCD3-202ENST00000356800 PCDHB10Q9UN67 800 aa15.07■□□□□ 0
SMARCD3-202ENST00000356800 ODAMA1E959 279 aa15.06■□□□□ 0
SMARCD3-202ENST00000356800 MEX3AA1L020 520 aaKnown RBP15.06■□□□□ 0
SMARCD3-202ENST00000356800 ADAM20O43506 726 aa15.06■□□□□ 0
SMARCD3-202ENST00000356800 SULT1A3P0DMM9 295 aa15.06■□□□□ 0
SMARCD3-202ENST00000356800 SULT1A4P0DMN0 295 aa15.06■□□□□ 0
SMARCD3-202ENST00000356800 FCN2Q15485 313 aa15.06■□□□□ 0
SMARCD3-202ENST00000356800 OR52B4Q8NGK2 314 aa15.06■□□□□ 0
SMARCD3-202ENST00000356800 UBALD1Q8TB05 177 aa15.06■□□□□ 0
SMARCD3-202ENST00000356800 ZNF431Q8TF32 576 aaPredicted RBP15.06■□□□□ 0
SMARCD3-202ENST00000356800 CCL19Q99731 98 aa15.06■□□□□ 0
SMARCD3-202ENST00000356800 RTBDNQ9BSG5 229 aaPredicted RBP15.06■□□□□ 0
SMARCD3-202ENST00000356800 TMPRSS13Q9BYE2 586 aa15.06■□□□□ 0
SMARCD3-202ENST00000356800 CHODLQ9H9P2 273 aa15.06■□□□□ 0
SMARCD3-202ENST00000356800 TAF9BQ9HBM6 251 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms