RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 CDK1P06493 297 aa13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 LPLP06858 475 aa13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 SNRNP70P08621 437 aaKnown RBP13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 VDAC2P45880 294 aaPredicted RBP13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 BEAN1Q3B7T3 259 aa13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 ATAD3CQ5T2N8 411 aa13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 STX19Q8N4C7 294 aa13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 JAGN1Q8N5M9 183 aa13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 DRAM1Q8N682 238 aa13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 OR56B4Q8NH76 319 aa13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 CPNE2Q96FN4 548 aaPredicted RBP13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 LIN7BQ9HAP6 207 aa13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 CHCHD3Q9NX63 227 aaKnown RBP13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 RCC2Q9P258 522 aaKnown RBP13.31□□□□□ -0.28
PDLIM7-201ENST00000355572 MYL12BO14950 172 aa13.3□□□□□ -0.28
PDLIM7-201ENST00000355572 MT-ND4P03905 459 aa13.3□□□□□ -0.28
PDLIM7-201ENST00000355572 OPN1MWP04001 364 aa13.3□□□□□ -0.28
PDLIM7-201ENST00000355572 OPN1MW2P0DN77 364 aa13.3□□□□□ -0.28
PDLIM7-201ENST00000355572 OPN1MW3P0DN78 364 aa13.3□□□□□ -0.28
PDLIM7-201ENST00000355572 PRRX1P54821 245 aa13.3□□□□□ -0.28
PDLIM7-201ENST00000355572 LOXL3P58215 753 aa13.3□□□□□ -0.28
PDLIM7-201ENST00000355572 SAMD5Q5TGI4 173 aa13.3□□□□□ -0.28
PDLIM7-201ENST00000355572 UNQ9370/PRO34162Q6UXP9 181 aa13.3□□□□□ -0.28
PDLIM7-201ENST00000355572 ZNF497Q6ZNH5 498 aa13.3□□□□□ -0.28
PDLIM7-201ENST00000355572 ZNF565Q8N9K5 539 aa13.3□□□□□ -0.28
PDLIM7-201ENST00000355572 CAPSLQ8WWF8 208 aa13.3□□□□□ -0.28
PDLIM7-201ENST00000355572 TOMM40LQ969M1 308 aa13.3□□□□□ -0.28
PDLIM7-201ENST00000355572 A0A1W2PRX2 142 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 TMEM30CPA0ZSE6 113 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 CD1AP06126 327 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 BRS3P32247 399 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 REG1BP48304 166 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 KCNJ3P48549 501 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 TAS2R43P59537 309 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 CD83Q01151 205 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 IRF3Q14653 427 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 MPV17LQ2QL34 196 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 C6orf141Q5SZD1 244 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 OR10K2Q6IF99 312 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 Q6ZPA2 131 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 LRRTM1Q86UE6 522 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 OR5AU1Q8NGC0 362 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 OR4K15Q8NH41 348 aa13.29□□□□□ -0.28
PDLIM7-201ENST00000355572 IGHV3-72A0A0B4J1Y9 119 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 C12orf77C9JDV5 145 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 PTGES3LE9PB15 166 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 GTF2F2P13984 249 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 MGMTP16455 207 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 RCC1P18754 421 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 ZNF134P52741 427 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 MED21Q13503 144 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 OXLD1Q5BKU9 147 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 ARSJQ5FYB0 599 aaPredicted RBP13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 AWAT2Q6E213 333 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 C16orf82Q7Z2V1 217 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 NDUFA11Q86Y39 141 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 OR1L1Q8NH94 360 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 ARL11Q969Q4 196 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 FAM46BQ96A09 425 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 RPEQ96AT9 228 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 Q96M66 194 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 GFI1Q99684 422 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 DNAH3Q8TD57 4116 aa13.28□□□□□ -0.28
PDLIM7-201ENST00000355572 LINC01548A6NM66 108 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 SC5DO75845 299 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 CEACAM3P40198 252 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 HNF4GQ14541 408 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 ACSM3Q53FZ2 586 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 RAB12Q6IQ22 244 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 LINC00596Q86U02 117 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 GAPTQ8N292 157 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 ZNF439Q8NDP4 499 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 NEK7Q8TDX7 302 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 ST6GALNAC6Q969X2 333 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 R3HDM4Q96D70 268 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 S100A13Q99584 98 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 TMED9Q9BVK6 235 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 SELENOIQ9C0D9 397 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 VCX3BQ9H321 246 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 GFOD1Q9NXC2 390 aa13.27□□□□□ -0.29
PDLIM7-201ENST00000355572 UBE2QL1A1L167 161 aa13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 OOSP1A8MZH6 123 aa13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 ZNF736B4DX44 427 aaPredicted RBP13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 AIPO00170 330 aa13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 SDCBPO00560 298 aaPredicted RBP13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 HSD17B6O14756 317 aa13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 TGP01266 2768 aa13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 IGKV1D-33P01593 117 aa13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 IGKV1-33P01594 117 aa13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 SLC35A2P78381 396 aa13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 GNMTQ14749 295 aa13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 C9orf152Q5JTZ5 239 aa13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 SYT6Q5T7P8 510 aaPredicted RBP13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 C5orf56Q8N8D9 126 aa13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 OR10A7Q8NGE5 316 aa13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 NOL4LQ96MY1 436 aaPredicted RBP13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 CKLFQ9UBR5 152 aa13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 PEX16Q9Y5Y5 336 aa13.26□□□□□ -0.29
PDLIM7-201ENST00000355572 NOTCH3Q9UM47 2321 aa13.25□□□□□ -0.29
PDLIM7-201ENST00000355572 A0A0A6YYD4 124 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms