RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 TMEM238LA0A1B0GVL6 79 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 A6NJY4 79 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 LIPT2A6NK58 231 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 CDIPTO14735 213 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 HIST1H1BP16401 226 aaKnown RBP13.07□□□□□ -0.32
LMX1B-201ENST00000355497 TMEM50BP56557 158 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 PRNTQ86SH4 94 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 LOC389332A0A1B0GUA5 103 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 PPP1CCP36873 323 aaKnown RBP13.07□□□□□ -0.32
LMX1B-201ENST00000355497 TWIST1Q15672 202 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 ADAD2Q8NCV1 583 aaKnown RBP13.07□□□□□ -0.32
LMX1B-201ENST00000355497 CT55Q8WUE5 264 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 SERGEFQ9UGK8 458 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 TBX21Q9UL17 535 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 TOPAZ1Q8N9V7 1692 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 SPINK2P20155 84 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 RGP1Q92546 391 aaPredicted RBP13.07□□□□□ -0.32
LMX1B-201ENST00000355497 ZNF764Q96H86 408 aaPredicted RBP13.07□□□□□ -0.32
LMX1B-201ENST00000355497 HSF4Q9ULV5 492 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 AGFG2O95081 481 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 HOXA6P31267 233 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 SSX8Q7RTT4 187 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 MRPL30Q8TCC3 161 aaKnown RBP13.07□□□□□ -0.32
LMX1B-201ENST00000355497 OR2H1Q9GZK4 316 aa13.07□□□□□ -0.32
LMX1B-201ENST00000355497 PITX3O75364 302 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 ZIC1Q15915 447 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 TTC32Q5I0X7 151 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 DNLZQ5SXM8 178 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 MIOXQ9UGB7 285 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 OR51B2Q9Y5P1 312 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 TMEM210A6NLX4 147 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 SYNGR1O43759 233 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 ZNF502Q8TBZ5 544 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 NUP98P52948 1817 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 KIF13AQ9H1H9 1805 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 CDS2O95674 445 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 YBX1P67809 324 aaKnown RBP13.06□□□□□ -0.32
LMX1B-201ENST00000355497 OR1L8Q8NGR8 309 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 RSG1Q9BU20 258 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 RPL36A-HNRNPH2H7BZ11 118 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 FFAR1O14842 300 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 LMX1BO60663 402 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 PSG2P11465 335 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 MUC15Q8N387 334 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 CDC42EP3Q9UKI2 254 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 RGPD2P0DJD1 1756 aa13.06□□□□□ -0.32
LMX1B-201ENST00000355497 KCNMB1Q16558 191 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 ECSCRQ19T08 205 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 LYZL2Q7Z4W2 148 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 ATG4DQ86TL0 474 aaPredicted RBP13.05□□□□□ -0.32
LMX1B-201ENST00000355497 OR11H7Q8NGC8 314 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 CRISPLD2Q9H0B8 497 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 RNF122Q9H9V4 155 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 TINAGQ9UJW2 476 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 J3QT63 122 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 CD74P04233 296 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 CXCL3P19876 107 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 RCC2Q9P258 522 aaKnown RBP13.05□□□□□ -0.32
LMX1B-201ENST00000355497 HBZP02008 142 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 FAM131CQ96AQ9 280 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 PAXXQ9BUH6 204 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 PLA2G2FQ9BZM2 168 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 APELAP0DMC3 54 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 HOXB3P14651 431 aaPredicted RBP13.05□□□□□ -0.32
LMX1B-201ENST00000355497 MMP9P14780 707 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 EPHA8P29322 1005 aaPredicted RBP13.05□□□□□ -0.32
LMX1B-201ENST00000355497 RELBQ01201 579 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 ZNF273Q14593 569 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 UBE2V2Q15819 145 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 OPN4Q9UHM6 478 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 FABP2P12104 132 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 PLP1P60201 277 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 OR1K1Q8NGR3 316 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 PTX4Q96A99 478 aa13.05□□□□□ -0.32
LMX1B-201ENST00000355497 ZNF205O95201 554 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 PIGYQ3MUY2 71 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 OR2V2Q96R30 315 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 LHX9Q9NQ69 397 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 ZNF71Q9NQZ8 489 aaPredicted RBP13.04□□□□□ -0.32
LMX1B-201ENST00000355497 LOC107984156A0A0G2JMH3 177 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 SEC11BP0C7V7 166 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 FAM3BP58499 235 aaPredicted RBP13.04□□□□□ -0.32
LMX1B-201ENST00000355497 HYAL1Q12794 435 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 KLF9Q13886 244 aaPredicted RBP13.04□□□□□ -0.32
LMX1B-201ENST00000355497 PRSS8Q16651 343 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 LRRC75BQ2VPJ9 315 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 ARL17AQ8IVW1 177 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 NUDT16L1Q9BRJ7 211 aaKnown RBP13.04□□□□□ -0.32
LMX1B-201ENST00000355497 C3AR1Q16581 482 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 VN1R4Q7Z5H5 301 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 RND1Q92730 232 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 TMEM189A5PLL7 270 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 MAGEA5P43359 124 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 NXPH1P58417 271 aa13.04□□□□□ -0.32
LMX1B-201ENST00000355497 ROM1Q03395 351 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 KLRB1Q12918 225 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 TMEM204Q9BSN7 226 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 GPR35Q9HC97 309 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 WNT16Q9UBV4 365 aa13.03□□□□□ -0.32
LMX1B-201ENST00000355497 IGHV3OR15-7A0A075B7D8 119 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms