RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 OR5A2Q8NGI9 324 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 GAL3ST2Q9H3Q3 398 aa11.16□□□□□ -0.62
SYNCRIP-201ENST00000355238 ZNF716A6NP11 495 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 NTN1O95631 604 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 HIST1H1BP16401 226 aaKnown RBP11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 DLX1P56177 255 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 RPL30P62888 115 aaKnown RBP11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 RUNX1Q01196 453 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 EIF3IQ13347 325 aaKnown RBP11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 ALG14Q96F25 216 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 MRPL37Q9BZE1 423 aaKnown RBP11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 ZNF256Q9Y2P7 627 aaPredicted RBP11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 KCNK7Q9Y2U2 307 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 SOD3P08294 240 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 DANCRP0C864 163 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 PPP1CAP62136 330 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 MYOZ1Q9NP98 299 aaPredicted RBP11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 BTF3P20290 206 aaKnown RBP11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 CEBPDP49716 269 aaPredicted RBP11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 CXorf67Q86X51 503 aaPredicted RBP11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 OR2Z1Q8NG97 314 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 PMCHL2Q9BQD1 86 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 MRPL18Q9H0U6 180 aaKnown RBP11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 DSPPQ9NZW4 1301 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 IGHV3-43A0A0B4J1X8 118 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 IGHV3-43DP0DP04 118 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 ACP1P24666 158 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 PMELP40967 661 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 CLDN18P56856 261 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 GAMTQ14353 236 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 ERASQ7Z444 233 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 KISS1RQ969F8 398 aaPredicted RBP11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 THYN1Q9P016 225 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 PRNDQ9UKY0 176 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 UFC1Q9Y3C8 167 aa11.15□□□□□ -0.62
SYNCRIP-201ENST00000355238 M0QZ24 198 aa11.15□□□□□ -0.63
SYNCRIP-201ENST00000355238 MPDU1O75352 247 aa11.15□□□□□ -0.63
SYNCRIP-201ENST00000355238 C10orf113Q5VZT2 155 aa11.15□□□□□ -0.63
SYNCRIP-201ENST00000355238 WDR25Q64LD2 544 aaPredicted RBP11.15□□□□□ -0.63
SYNCRIP-201ENST00000355238 PRSS41Q7RTY9 318 aa11.15□□□□□ -0.63
SYNCRIP-201ENST00000355238 VSTM2LQ96N03 204 aa11.15□□□□□ -0.63
SYNCRIP-201ENST00000355238 KIR3DL2P43630 455 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 RND3P61587 244 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 VASH2Q86V25 355 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 SLC25A38Q96DW6 304 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 PGLYRP3Q96LB9 341 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 SF3B6Q9Y3B4 125 aaKnown RBP11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 TRBV9A0A0B4J1U6 114 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 A8MWL6 223 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 CD8AP01732 235 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 AREGP15514 252 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 MPLP40238 635 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 SPTY2D1-AS1A0A0U1RR47 76 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 C1QL1O75973 258 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 PSG2P11465 335 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 FOLR2P14207 255 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 PNLIPP16233 465 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 PSG6Q00889 435 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 OR10S1Q8NGN2 331 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 OR4C46A6NHA9 309 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 GALNSP34059 522 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 UQCRFS1P47985 274 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 P2RY4P51582 365 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 ZFC3H1O60293 1989 aaKnown RBP11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 EVPLQ92817 2033 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 NDUFB4O95168 129 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 ZNF665Q9H7R5 613 aa11.14□□□□□ -0.63
SYNCRIP-201ENST00000355238 hADV38S2A0JD32 116 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 LIPT2A6NK58 231 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 MS4A18H0YCH9 400 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 ZFP36L2P47974 494 aaKnown RBP11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 MS4A18Q3C1V0 323 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 APCDD1LQ8NCL9 501 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 CXXC4Q9H2H0 198 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 FOXJ2Q9P0K8 574 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 METTL12A8MUP2 240 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 NPY1RP25929 384 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 A0A1W2PR80 420 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 LINC00587B1AMM8 73 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 SPRY3O43610 288 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 BGLAPP02818 100 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 AGAP20933 346 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 CD1BP29016 333 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 MRPS11P82912 194 aaKnown RBP11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 Q5BKY6 102 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 RBM14Q96PK6 669 aaKnown RBP11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 SDHCQ99643 169 aaPredicted RBP11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 LEPROTL1O95214 131 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 FCGR3AP08637 254 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 HOXC4P09017 264 aaPredicted RBP11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 LIMS1P48059 325 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 WIPI1Q5MNZ9 446 aaPredicted RBP11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 COX14Q96I36 57 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 H0Y980 276 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 K7ESF4 209 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 ACER2Q5QJU3 275 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 SIT1Q9Y3P8 196 aa11.13□□□□□ -0.63
SYNCRIP-201ENST00000355238 LMO7DNF2Z398 122 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms