RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 LYRM2Q9NU23 88 aaPredicted RBP18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 CLCF1Q9UBD9 225 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 CACFD1Q9UGQ2 172 aa18.93■□□□□ 0.62
NKX2-1-201ENST00000354822 CNOT4O95628 575 aaKnown RBP18.92■□□□□ 0.62
NKX2-1-201ENST00000354822 SELEP16581 610 aa18.92■□□□□ 0.62
NKX2-1-201ENST00000354822 IGHV1-2P23083 117 aa18.92■□□□□ 0.62
NKX2-1-201ENST00000354822 CAMLGP49069 296 aa18.92■□□□□ 0.62
NKX2-1-201ENST00000354822 POLR2GP62487 172 aaKnown RBP eCLIP18.92■□□□□ 0.62
NKX2-1-201ENST00000354822 AIFM2Q9BRQ8 373 aa18.92■□□□□ 0.62
NKX2-1-201ENST00000354822 AGPAT2O15120 278 aa18.92■□□□□ 0.62
NKX2-1-201ENST00000354822 OR8U9P0C7N5 309 aa18.92■□□□□ 0.62
NKX2-1-201ENST00000354822 ERVK11-1P61568 191 aa18.92■□□□□ 0.62
NKX2-1-201ENST00000354822 FAM214BQ7L5A3 538 aa18.92■□□□□ 0.62
NKX2-1-201ENST00000354822 OR8U1Q8NH10 309 aa18.92■□□□□ 0.62
NKX2-1-201ENST00000354822 WNT2BQ93097 391 aa18.92■□□□□ 0.62
NKX2-1-201ENST00000354822 OR2J1Q9GZK6 312 aa18.92■□□□□ 0.62
NKX2-1-201ENST00000354822 FAM24AA6NFZ4 105 aa18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 ATP6V1G2-DDX39BF2Z307 99 aa18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 PITX3O75364 302 aa18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 SNCAP37840 140 aa18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 PEA15Q15121 130 aa18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 GABRA6Q16445 453 aa18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 SCCPDHQ8NBX0 429 aa18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 ASCL3Q9NQ33 180 aa18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 ERRFI1Q9UJM3 462 aaPredicted RBP18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 H7C2Y5 167 aa18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 PRH1P02810 166 aa18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 SLC25A6P12236 298 aa18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 IDH3GP51553 393 aaPredicted RBP18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 MIDNQ504T8 468 aa18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 Q6ZT83 130 aa18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 C19orf12Q9NSK7 152 aa18.91■□□□□ 0.62
NKX2-1-201ENST00000354822 ID4P47928 161 aa18.9■□□□□ 0.62
NKX2-1-201ENST00000354822 BAXQ07812 192 aa18.9■□□□□ 0.62
NKX2-1-201ENST00000354822 CXorf66Q5JRM2 361 aaPredicted RBP18.9■□□□□ 0.62
NKX2-1-201ENST00000354822 TMEM88Q6PEY1 159 aa18.9■□□□□ 0.62
NKX2-1-201ENST00000354822 VASH2Q86V25 355 aa18.9■□□□□ 0.62
NKX2-1-201ENST00000354822 TMEM252Q8N6L7 170 aa18.9■□□□□ 0.62
NKX2-1-201ENST00000354822 OR10V1Q8NGI7 309 aa18.9■□□□□ 0.62
NKX2-1-201ENST00000354822 AKR1E2Q96JD6 320 aa18.9■□□□□ 0.62
NKX2-1-201ENST00000354822 ADAT1Q9BUB4 502 aaKnown RBP18.9■□□□□ 0.62
NKX2-1-201ENST00000354822 KPTNQ9Y664 436 aa18.9■□□□□ 0.62
NKX2-1-201ENST00000354822 ZNF318Q5VUA4 2279 aa18.9■□□□□ 0.62
NKX2-1-201ENST00000354822 TMEM210A6NLX4 147 aa18.89■□□□□ 0.62
NKX2-1-201ENST00000354822 IQCF6A8MYZ5 107 aa18.89■□□□□ 0.62
NKX2-1-201ENST00000354822 FAM157AC9JC47 383 aa18.89■□□□□ 0.62
NKX2-1-201ENST00000354822 SSSCA1O60232 199 aa18.89■□□□□ 0.62
NKX2-1-201ENST00000354822 HEXAP06865 529 aa18.89■□□□□ 0.62
NKX2-1-201ENST00000354822 CELA3BP08861 270 aa18.89■□□□□ 0.62
NKX2-1-201ENST00000354822 ACAA1P09110 424 aaPredicted RBP18.89■□□□□ 0.62
NKX2-1-201ENST00000354822 CCL11P51671 97 aa18.89■□□□□ 0.62
NKX2-1-201ENST00000354822 PMP22Q01453 160 aa18.89■□□□□ 0.62
NKX2-1-201ENST00000354822 ZNF616Q08AN1 781 aa18.89■□□□□ 0.62
NKX2-1-201ENST00000354822 ZNF146Q15072 292 aa18.89■□□□□ 0.62
NKX2-1-201ENST00000354822 ZNF497Q6ZNH5 498 aa18.89■□□□□ 0.62
NKX2-1-201ENST00000354822 HSD17B11Q8NBQ5 300 aa18.89■□□□□ 0.62
NKX2-1-201ENST00000354822 SH2D1BO14796 132 aa18.89■□□□□ 0.61
NKX2-1-201ENST00000354822 HSPA12AO43301 675 aa18.89■□□□□ 0.61
NKX2-1-201ENST00000354822 OR2H2O95918 312 aa18.89■□□□□ 0.61
NKX2-1-201ENST00000354822 SERPINE2P07093 398 aa18.89■□□□□ 0.61
NKX2-1-201ENST00000354822 PGA5P0DJD9 388 aa18.89■□□□□ 0.61
NKX2-1-201ENST00000354822 NPBWR1P48145 328 aa18.89■□□□□ 0.61
NKX2-1-201ENST00000354822 FLI1Q01543 452 aaPredicted RBP18.89■□□□□ 0.61
NKX2-1-201ENST00000354822 IGFL2Q6UWQ7 119 aa18.89■□□□□ 0.61
NKX2-1-201ENST00000354822 WDR86Q86TI4 376 aa18.89■□□□□ 0.61
NKX2-1-201ENST00000354822 DOCK7Q96N67 2140 aa18.89■□□□□ 0.61
NKX2-1-201ENST00000354822 A0A1B0GU03 582 aa18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 IGSF23A1L1A6 192 aa18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 WRBO00258 174 aa18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 SLC33A1O00400 549 aaPredicted RBP18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 NKX2-8O15522 239 aa18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 F12P00748 615 aaPredicted RBP18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 MYPOPQ86VE0 399 aaPredicted RBP18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 SLC25A40Q8TBP6 338 aa18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 TRIB1Q96RU8 372 aa18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 GPHA2Q96T91 129 aa18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 PARP12Q9H0J9 701 aaKnown RBP18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 UMAD1C9J7I0 102 aa18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 TNFSF12O43508 249 aa18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 GUSBP1Q15486 140 aa18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 LFNGQ8NES3 379 aa18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 OR1J1Q8NGS3 322 aa18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 PLPPR1Q8TBJ4 325 aa18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 SH3BGRL3Q9H299 93 aa18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 TRAPPC2LQ9UL33 140 aa18.88■□□□□ 0.61
NKX2-1-201ENST00000354822 MED12LQ86YW9 2145 aa18.87■□□□□ 0.61
NKX2-1-201ENST00000354822 PROB1E7EW31 1015 aa18.87■□□□□ 0.61
NKX2-1-201ENST00000354822 LYZL6O75951 148 aa18.87■□□□□ 0.61
NKX2-1-201ENST00000354822 NXPH2O95156 264 aa18.87■□□□□ 0.61
NKX2-1-201ENST00000354822 CBR1P16152 277 aa18.87■□□□□ 0.61
NKX2-1-201ENST00000354822 GUK1Q16774 197 aa18.87■□□□□ 0.61
NKX2-1-201ENST00000354822 FIP1L1Q6UN15 594 aaKnown RBP18.87■□□□□ 0.61
NKX2-1-201ENST00000354822 FDCSPQ8NFU4 85 aa18.87■□□□□ 0.61
NKX2-1-201ENST00000354822 IL1F10Q8WWZ1 152 aa18.87■□□□□ 0.61
NKX2-1-201ENST00000354822 CACNA1HO95180 2353 aa18.87■□□□□ 0.61
NKX2-1-201ENST00000354822 AQP7O14520 342 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 CDIPTO14735 213 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 SPINK2P20155 84 aa18.86■□□□□ 0.61
NKX2-1-201ENST00000354822 ZNF154Q13106 437 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms