RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 KIR2DS1Q14954 304 aa16.69■□□□□ 0.26
COL13A1-201ENST00000354547 DCAF10Q5QP82 559 aa16.69■□□□□ 0.26
COL13A1-201ENST00000354547 IL22RA1Q8N6P7 574 aa16.69■□□□□ 0.26
COL13A1-201ENST00000354547 C15orf54Q8N8G6 183 aa16.69■□□□□ 0.26
COL13A1-201ENST00000354547 IER2Q9BTL4 223 aa16.69■□□□□ 0.26
COL13A1-201ENST00000354547 LYRM2Q9NU23 88 aaPredicted RBP16.69■□□□□ 0.26
COL13A1-201ENST00000354547 OR1A1Q9P1Q5 309 aa16.69■□□□□ 0.26
COL13A1-201ENST00000354547 LIPGQ9Y5X9 500 aa16.69■□□□□ 0.26
COL13A1-201ENST00000354547 WNT5AP41221 380 aa16.69■□□□□ 0.26
COL13A1-201ENST00000354547 SOHLH1Q5JUK2 328 aa16.69■□□□□ 0.26
COL13A1-201ENST00000354547 MRPL30Q8TCC3 161 aaKnown RBP16.69■□□□□ 0.26
COL13A1-201ENST00000354547 LINC00470Q9BZP3 86 aa16.69■□□□□ 0.26
COL13A1-201ENST00000354547 COA4Q9NYJ1 87 aa16.69■□□□□ 0.26
COL13A1-201ENST00000354547 PSG2P11465 335 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 ZNF14P17017 642 aaPredicted RBP16.68■□□□□ 0.26
COL13A1-201ENST00000354547 VDAC1P21796 283 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 APLNRP35414 380 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 RAB5CP51148 216 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 TMEM267Q0VDI3 215 aaPredicted RBP16.68■□□□□ 0.26
COL13A1-201ENST00000354547 HMGN3Q15651 99 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 SLC25A24Q6NUK1 477 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 OR5A2Q8NGI9 324 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 OR10J5Q8NHC4 309 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 SLC25A31Q9H0C2 315 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 TRAV24A0A0B4J272 114 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 SIRPB1O00241 398 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 EIF3GO75821 320 aaKnown RBP eCLIP16.68■□□□□ 0.26
COL13A1-201ENST00000354547 SERPINE2P07093 398 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 SELEP16581 610 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 MPLP40238 635 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 SULT1A1P50225 295 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 GTF3C1Q12789 2109 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 ATP1A1-AS1Q5TC04 95 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 COMMD1Q8N668 190 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 GUCD1Q96NT3 240 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 PPP1R3CQ9UQK1 317 aa16.68■□□□□ 0.26
COL13A1-201ENST00000354547 HNF4GQ14541 408 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 NMSQ5H8A3 153 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 ODF3L1Q8IXM7 274 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 FAM58AQ8N1B3 248 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 Q8NFD4 153 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 OR5P3Q8WZ94 311 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 C11orf1Q9H5F2 150 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 BDP1A6H8Y1 2624 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 CNOT4O95628 575 aaKnown RBP16.67■□□□□ 0.26
COL13A1-201ENST00000354547 CLN3Q13286 438 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 MPV17LQ2QL34 196 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 PCSK4Q6UW60 755 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 RBMS3Q6XE24 437 aaKnown RBP16.67■□□□□ 0.26
COL13A1-201ENST00000354547 ABI3Q9P2A4 366 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 FAM90A10PA6NDY2 464 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 FAM90A18PA6NE21 464 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 FAM90A16PA6NEW6 464 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 FAM90A20PA6NIJ5 464 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 FAM90A8PA6NJQ4 464 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 FAM90A7PA6NKC0 464 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 FAM90A22PA8MWA6 464 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 FAM90A12PA8MX19 464 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 FAM90A5PA8MXJ8 464 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 FAM90A23PA8MXZ1 464 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 HSPA12AO43301 675 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 PITX3O75364 302 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 FAM90A15PP0C7V4 464 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 FAM90A13PP0C7W8 464 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 FAM90A14PP0C7W9 464 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 FAM90A24PP0C7X0 464 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 MEOX1P50221 254 aa16.67■□□□□ 0.26
COL13A1-201ENST00000354547 EIF2S3LQ2VIR3 472 aaKnown RBP16.67■□□□□ 0.26
COL13A1-201ENST00000354547 TUSC2O75896 110 aa16.66■□□□□ 0.26
COL13A1-201ENST00000354547 UCP1P25874 307 aa16.66■□□□□ 0.26
COL13A1-201ENST00000354547 ARR3P36575 388 aa16.66■□□□□ 0.26
COL13A1-201ENST00000354547 PMELP40967 661 aa16.66■□□□□ 0.26
COL13A1-201ENST00000354547 NRN1LQ496H8 165 aa16.66■□□□□ 0.26
COL13A1-201ENST00000354547 PLPPR1Q8TBJ4 325 aa16.66■□□□□ 0.26
COL13A1-201ENST00000354547 TAAR3PQ9P1P4 343 aa16.66■□□□□ 0.26
COL13A1-201ENST00000354547 RBFOX3A6NFN3 312 aa16.66■□□□□ 0.26
COL13A1-201ENST00000354547 DEGS1O15121 323 aa16.66■□□□□ 0.26
COL13A1-201ENST00000354547 IAPPP10997 89 aa16.66■□□□□ 0.26
COL13A1-201ENST00000354547 UCP2P55851 309 aa16.66■□□□□ 0.26
COL13A1-201ENST00000354547 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.66■□□□□ 0.26
COL13A1-201ENST00000354547 DLL3Q9NYJ7 618 aa16.66■□□□□ 0.26
COL13A1-201ENST00000354547 KCNS2Q9ULS6 477 aa16.66■□□□□ 0.26
COL13A1-201ENST00000354547 SVILO95425 2214 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 LNP1A1A4G5 178 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 ZNF727A8MUV8 499 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 MT-CO3P00414 261 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 MT-ND4LP03901 98 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 F2RP25116 425 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 MEOX2P50222 304 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 TMEM164Q5U3C3 297 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 MDP1Q86V88 176 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 GPR146Q96CH1 333 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 CFAP47Q6ZTR5 3102 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 CELA3BP08861 270 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 GNG3P63215 75 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 HOXA4Q00056 320 aaPredicted RBP16.65■□□□□ 0.26
COL13A1-201ENST00000354547 SLC16A13Q7RTY0 426 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 THNSL2Q86YJ6 484 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 SAXO1Q8IYX7 474 aa16.65■□□□□ 0.26
COL13A1-201ENST00000354547 OR2W1Q9Y3N9 320 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms