RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 ACAA1P09110 424 aaPredicted RBP8.78□□□□□ -1
COL11A1-201ENST00000353414 MS4A3Q96HJ5 214 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 RASL12Q9NYN1 266 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 TPRP12270 2363 aaKnown RBP8.78□□□□□ -1
COL11A1-201ENST00000353414 C9orf170A2RU37 121 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 FAM157CP0CG43 387 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 CTLA4P16410 223 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 ISL1P61371 349 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 MRAP2Q96G30 205 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 MEGF10Q96KG7 1140 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 RASL10BQ96S79 203 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 MAP1LC3CQ9BXW4 147 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 DNAJB12Q9NXW2 375 aaKnown RBP8.78□□□□□ -1
COL11A1-201ENST00000353414 PAM16Q9Y3D7 125 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 PLXNB2O15031 1838 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 CXCL10P02778 98 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 MGAT2Q10469 447 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 OR4S2Q8NH73 311 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 FAM216AQ8WUB2 273 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 PHYHIPQ92561 330 aa8.78□□□□□ -1
COL11A1-201ENST00000353414 RP1L1Q8IWN7 2480 aaPredicted RBP8.78□□□□□ -1
COL11A1-201ENST00000353414 TMPRSS3P57727 454 aa8.77□□□□□ -1
COL11A1-201ENST00000353414 PTOV1Q86YD1 416 aa8.77□□□□□ -1
COL11A1-201ENST00000353414 BAP18Q8IXM2 172 aa8.77□□□□□ -1
COL11A1-201ENST00000353414 SLC26A10Q8NG04 563 aa8.77□□□□□ -1
COL11A1-201ENST00000353414 LINC01560Q8TB33 94 aa8.77□□□□□ -1
COL11A1-201ENST00000353414 NAA60Q9H7X0 242 aa8.77□□□□□ -1
COL11A1-201ENST00000353414 ZNF831Q5JPB2 1677 aa8.77□□□□□ -1
COL11A1-201ENST00000353414 PROB1E7EW31 1015 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 SRSF10O75494 262 aaKnown RBP8.77□□□□□ -1.01
COL11A1-201ENST00000353414 CLDN14O95500 239 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 PPP1R17O96001 155 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 PP6455Q8WZ26 134 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 GPR61Q9BZJ8 451 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 MOB4Q9Y3A3 225 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 OR51B2Q9Y5P1 312 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 BCL2L11O43521 198 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 SFTPCP11686 197 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 DAOP14920 347 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 IL11P20809 199 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 GAPTQ8N292 157 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 OIT3Q8WWZ8 545 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 CHST1O43916 411 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 EVX1P49640 407 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 HERVK_113P61574 105 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 C1orf185Q5T7R7 199 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 Q6ZNX1 250 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 CLRN3Q8NCR9 226 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 ABHD14BQ96IU4 210 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 OR10C1Q96KK4 312 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 TP53RKQ96S44 253 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 FER1L5A0AVI2 2057 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 A0A087X0M5 115 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 IGKV3D-20A0A0C4DH25 116 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 A0A1B0GX30 115 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 DHRS7CA6NNS2 312 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 ADAP1O75689 374 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 S100A8P05109 93 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 RPS4Y1P22090 263 aaKnown RBP8.77□□□□□ -1.01
COL11A1-201ENST00000353414 OR4A47Q6IF82 309 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 LIAT1Q6ZQX7 453 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 NUFIP2Q7Z417 695 aaKnown RBP8.77□□□□□ -1.01
COL11A1-201ENST00000353414 TCTEX1D1Q8N7M0 179 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 PIMREGQ9BSJ6 248 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 MAST2Q6P0Q8 1798 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 HMX2A2RU54 273 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 DEDDO75618 318 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 CLDN18P56856 261 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 FHL5Q5TD97 284 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 MRM1Q6IN84 353 aaKnown RBP8.77□□□□□ -1.01
COL11A1-201ENST00000353414 SNRNP40Q96DI7 357 aaKnown RBP8.77□□□□□ -1.01
COL11A1-201ENST00000353414 GHITMQ9H3K2 345 aa8.77□□□□□ -1.01
COL11A1-201ENST00000353414 LOC107984156A0A0G2JMH3 177 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 IGLV3-27P01718 113 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 SIGLEC14Q08ET2 396 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 PNLIPRP3Q17RR3 467 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 ARL17AQ8IVW1 177 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 ADAD2Q8NCV1 583 aaKnown RBP8.76□□□□□ -1.01
COL11A1-201ENST00000353414 OR13C6PQ8NH95 151 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 GPHA2Q96T91 129 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 CCL28Q9NRJ3 127 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 ESPL1Q14674 2120 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 PSG2P11465 335 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 FPR2P25090 351 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 BEX4Q9NWD9 120 aaPredicted RBP8.76□□□□□ -1.01
COL11A1-201ENST00000353414 METTL1Q9UBP6 276 aaKnown RBP8.76□□□□□ -1.01
COL11A1-201ENST00000353414 TRDCB7Z8K6 153 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 SMPD2O60906 423 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 HOXC4P09017 264 aaPredicted RBP8.76□□□□□ -1.01
COL11A1-201ENST00000353414 MDKP21741 143 aaPredicted RBP8.76□□□□□ -1.01
COL11A1-201ENST00000353414 SRD5A2P31213 254 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 ZFP36L2P47974 494 aaKnown RBP8.76□□□□□ -1.01
COL11A1-201ENST00000353414 NXPH1P58417 271 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 ARF6P62330 175 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 RPL31P62899 125 aaKnown RBP8.76□□□□□ -1.01
COL11A1-201ENST00000353414 ST3GAL2Q16842 350 aa8.76□□□□□ -1.01
COL11A1-201ENST00000353414 SPAG8Q99932 426 aaPredicted RBP8.76□□□□□ -1.01
COL11A1-201ENST00000353414 CISD1Q9NZ45 108 aaKnown RBP8.76□□□□□ -1.01
COL11A1-201ENST00000353414 TNRC6CQ9HCJ0 1690 aaKnown RBP8.76□□□□□ -1.01
COL11A1-201ENST00000353414 A0A0B4J293 547 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms