RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 GATAD1Q8WUU5 269 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 BCL2L2Q92843 193 aaPredicted RBP11.42□□□□□ -0.58
IFT88-202ENST00000351808 GPR146Q96CH1 333 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 SLC46A1Q96NT5 459 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 REPIN1Q9BWE0 567 aaKnown RBP11.42□□□□□ -0.58
IFT88-202ENST00000351808 RTN4RQ9BZR6 473 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 UBE2J1Q9Y385 318 aaPredicted RBP11.42□□□□□ -0.58
IFT88-202ENST00000351808 VSTM2BA6NLU5 285 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 WNT2P09544 360 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 PVRP15151 417 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 CCR2P41597 374 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 BLKP51451 505 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 PAX9P55771 341 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 BAGE3Q86Y29 109 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 BAGE2Q86Y30 109 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 OR8B12Q8NGG6 310 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 OR6C1Q96RD1 312 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 ZNF430Q9H8G1 570 aaPredicted RBP11.42□□□□□ -0.58
IFT88-202ENST00000351808 HTTP42858 3142 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 OR6C6A6NF89 314 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 ZNF814B7Z6K7 855 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 WDR1O75083 606 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 CRISP2P16562 243 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 DTYMKP23919 212 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 BRICD5Q6PL45 260 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 CRIP3Q6Q6R5 217 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 FIGLAQ6QHK4 219 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 TMEM144Q7Z5S9 345 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 C11orf40Q8WZ69 217 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 NAT6Q93015 286 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 SIGLEC12Q96PQ1 595 aa11.42□□□□□ -0.58
IFT88-202ENST00000351808 GTF3C1Q12789 2109 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 A0A1W2PR80 420 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 OPN1LWP04000 364 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 TSPOP30536 169 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 P2RY2P41231 377 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 LHX2P50458 406 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 ID3Q02535 119 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 LIN37Q96GY3 246 aaPredicted RBP11.41□□□□□ -0.58
IFT88-202ENST00000351808 SPIN2AQ99865 258 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 SPIN2BQ9BPZ2 258 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 SLC39A9Q9NUM3 307 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 CLN8Q9UBY8 286 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 SH3BGRL2Q9UJC5 107 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 TMEM250H0YL14 139 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 PLPP3O14495 311 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 MPPED1O15442 326 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 DXOO77932 396 aaKnown RBP11.41□□□□□ -0.58
IFT88-202ENST00000351808 EML2O95834 649 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 IL11P20809 199 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 BIDP55957 195 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 ELAVL3Q14576 367 aaKnown RBP11.41□□□□□ -0.58
IFT88-202ENST00000351808 ZNF468Q5VIY5 522 aaPredicted RBP11.41□□□□□ -0.58
IFT88-202ENST00000351808 C20orf196Q8IYI0 205 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 SIGLECL1Q8N7X8 197 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 OR10G6Q8NH81 332 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 OR14C36Q8NHC7 312 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 SSC4DQ8WTU2 575 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 RERGQ96A58 199 aaPredicted RBP11.41□□□□□ -0.58
IFT88-202ENST00000351808 MRGPRX1Q96LB2 322 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 WNT10AQ9GZT5 417 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 TMEM222Q9H0R3 208 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 HCFC1R1Q9NWW0 138 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 VDAC3Q9Y277 283 aa11.41□□□□□ -0.58
IFT88-202ENST00000351808 CBLN1P23435 193 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 VIPR2P41587 438 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 PSMB3P49720 205 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 CCDC71LQ8N9Z2 235 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 SGMS2Q8NHU3 365 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 FAM3CQ92520 227 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 TM2D1Q9BX74 207 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 A0A1W2PRS3 328 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 C1QTNF9BB2RNN3 333 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 NPBWR2P48146 333 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 ZNF121P58317 390 aaPredicted RBP11.4□□□□□ -0.58
IFT88-202ENST00000351808 ZP4Q12836 540 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.4□□□□□ -0.58
IFT88-202ENST00000351808 S100A7AQ86SG5 101 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 SELENOHQ8IZQ5 122 aaKnown RBP11.4□□□□□ -0.58
IFT88-202ENST00000351808 ZNF596Q8TC21 504 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 SLC35D1Q9NTN3 355 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 MED29Q9NX70 200 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 ELOVL5Q9NYP7 299 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 HCFC2Q9Y5Z7 792 aa11.4□□□□□ -0.58
IFT88-202ENST00000351808 VCANP13611 3396 aa11.4□□□□□ -0.59
IFT88-202ENST00000351808 HS3ST1O14792 307 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 IFI6P09912 130 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 ESDP10768 282 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 FCGR2AP12318 317 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 CYBAP13498 195 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 MRPL49Q13405 166 aaKnown RBP11.39□□□□□ -0.59
IFT88-202ENST00000351808 WFDC8Q8IUA0 241 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 ATOH7Q8N100 152 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 OR2M3Q8NG83 312 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 APOOQ9BUR5 198 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 KIR3DX1Q9H7L2 352 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 ZNF586Q9NXT0 402 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 MYO9BQ13459 2157 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 PRRT4C9JH25 899 aa11.39□□□□□ -0.59
IFT88-202ENST00000351808 H0YIG0 161 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms