RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 C17orf98A8MV24 154 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 XRCC3O43542 346 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 ORC5O43913 435 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 TPPPO94811 219 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 MT-ND4P03905 459 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 ERVFRD-1P60508 538 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 ARF6P62330 175 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 PNLIPRP3Q17RR3 467 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 TMEM30BQ3MIR4 351 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 METAP1DQ6UB28 335 aaPredicted RBP15.37■□□□□ 0.05
CDHR4-201ENST00000343366 NANPQ8TBE9 248 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 PLPPR1Q8TBJ4 325 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 C15orf40Q8WUR7 153 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 UPRTQ96BW1 309 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 SULT4A1Q9BR01 284 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 SIRPDQ9H106 197 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 C12orf4Q9NQ89 552 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 KCNIP1Q9NZI2 227 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 ZNF581Q9P0T4 197 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 RABL2AQ9UBK7 228 aaPredicted RBP15.37■□□□□ 0.05
CDHR4-201ENST00000343366 RABL2BQ9UNT1 228 aa15.37■□□□□ 0.05
CDHR4-201ENST00000343366 WNK2Q9Y3S1 2297 aa15.36■□□□□ 0.05
CDHR4-201ENST00000343366 CD3GP09693 182 aa15.36■□□□□ 0.05
CDHR4-201ENST00000343366 PRTN3P24158 256 aa15.36■□□□□ 0.05
CDHR4-201ENST00000343366 GUCA2AQ02747 115 aa15.36■□□□□ 0.05
CDHR4-201ENST00000343366 PLA2G7Q13093 441 aa15.36■□□□□ 0.05
CDHR4-201ENST00000343366 BRICD5Q6PL45 260 aa15.36■□□□□ 0.05
CDHR4-201ENST00000343366 TPRX1Q8N7U7 411 aa15.36■□□□□ 0.05
CDHR4-201ENST00000343366 CMSS1Q9BQ75 279 aaKnown RBP15.36■□□□□ 0.05
CDHR4-201ENST00000343366 HEXA-AS1Q9H8Q6 139 aa15.36■□□□□ 0.05
CDHR4-201ENST00000343366 LINC00574Q9H8X3 128 aa15.36■□□□□ 0.05
CDHR4-201ENST00000343366 MBNL3Q9NUK0 354 aaKnown RBP15.36■□□□□ 0.05
CDHR4-201ENST00000343366 KBTBD11-OT1A0A1B0GTJ5 212 aa15.35■□□□□ 0.05
CDHR4-201ENST00000343366 MFNGO00587 321 aa15.35■□□□□ 0.05
CDHR4-201ENST00000343366 CLPXO76031 633 aa15.35■□□□□ 0.05
CDHR4-201ENST00000343366 NAPSAO96009 420 aa15.35■□□□□ 0.05
CDHR4-201ENST00000343366 MMP9P14780 707 aa15.35■□□□□ 0.05
CDHR4-201ENST00000343366 TALDO1P37837 337 aa15.35■□□□□ 0.05
CDHR4-201ENST00000343366 MNDAP41218 407 aa15.35■□□□□ 0.05
CDHR4-201ENST00000343366 GLP1RP43220 463 aa15.35■□□□□ 0.05
CDHR4-201ENST00000343366 ZNF273Q14593 569 aa15.35■□□□□ 0.05
CDHR4-201ENST00000343366 SRSF7Q16629 238 aaKnown RBP eCLIP15.35■□□□□ 0.05
CDHR4-201ENST00000343366 CDNFQ49AH0 187 aa15.35■□□□□ 0.05
CDHR4-201ENST00000343366 PLAC9Q5JTB6 97 aa15.35■□□□□ 0.05
CDHR4-201ENST00000343366 HEPN1Q6WQI6 88 aa15.35■□□□□ 0.05
CDHR4-201ENST00000343366 MMP27Q9H306 513 aa15.35■□□□□ 0.05
CDHR4-201ENST00000343366 CHMP1AQ9HD42 196 aaPredicted RBP15.35■□□□□ 0.05
CDHR4-201ENST00000343366 ING3Q9NXR8 418 aa15.35■□□□□ 0.05
CDHR4-201ENST00000343366 RGS5O15539 181 aa15.34■□□□□ 0.05
CDHR4-201ENST00000343366 SPINT2O43291 252 aa15.34■□□□□ 0.05
CDHR4-201ENST00000343366 ARFRP1Q13795 201 aa15.34■□□□□ 0.05
CDHR4-201ENST00000343366 MOGAT2Q3SYC2 334 aa15.34■□□□□ 0.05
CDHR4-201ENST00000343366 HACD4Q5VWC8 232 aa15.34■□□□□ 0.05
CDHR4-201ENST00000343366 SLIRPQ9GZT3 109 aaKnown RBP15.34■□□□□ 0.05
CDHR4-201ENST00000343366 NXF2Q9GZY0 626 aaKnown RBP15.34■□□□□ 0.05
CDHR4-201ENST00000343366 AK3Q9UIJ7 227 aa15.34■□□□□ 0.05
CDHR4-201ENST00000343366 TRRAPQ9Y4A5 3859 aa15.33■□□□□ 0.05
CDHR4-201ENST00000343366 A6NHS1 94 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 FAM25AB3EWG3 89 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 FAM25CB3EWG5 89 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 FAM25GB3EWG6 89 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 MELTFP08582 738 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 CGB3P0DN86 165 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 CGB7P0DN87 165 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 IGHV1-8P0DP01 117 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 GNB3P16520 340 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 DTYMKP23919 212 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 CDK2P24941 298 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 DLX6P56179 175 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 ZNF260Q3ZCT1 412 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 TMEM69Q5SWH9 247 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 GPR157Q5UAW9 335 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 ZNF880Q6PDB4 577 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 BAIAP2L2Q6UXY1 529 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 TCF23Q7RTU1 214 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 VMO1Q7Z5L0 202 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 Q8N7P7 452 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 OR52M1Q8NGK5 317 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 OR13A1Q8NGR1 328 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 OR13D1Q8NGV5 346 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 MCFD2Q8NI22 146 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 MRPL30Q8TCC3 161 aaKnown RBP15.33■□□□□ 0.04
CDHR4-201ENST00000343366 MRGPRDQ8TDS7 321 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 PCGF1Q9BSM1 259 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 CALYQ9NYX4 217 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 KCNK7Q9Y2U2 307 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 SESN1Q9Y6P5 492 aa15.33■□□□□ 0.04
CDHR4-201ENST00000343366 TRAV18A0A075B6X5 111 aa15.32■□□□□ 0.04
CDHR4-201ENST00000343366 NPIPB11E5RHQ5 1161 aa15.32■□□□□ 0.04
CDHR4-201ENST00000343366 HPGDSO60760 199 aa15.32■□□□□ 0.04
CDHR4-201ENST00000343366 CCL3L1P16619 93 aa15.32■□□□□ 0.04
CDHR4-201ENST00000343366 CBX5P45973 191 aa15.32■□□□□ 0.04
CDHR4-201ENST00000343366 GNG2P59768 71 aa15.32■□□□□ 0.04
CDHR4-201ENST00000343366 Q3ZCU0 254 aa15.32■□□□□ 0.04
CDHR4-201ENST00000343366 RTN4RL2Q86UN3 420 aa15.32■□□□□ 0.04
CDHR4-201ENST00000343366 C11orf42Q8N5U0 333 aa15.32■□□□□ 0.04
CDHR4-201ENST00000343366 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.32■□□□□ 0.04
CDHR4-201ENST00000343366 OR4K15Q8NH41 348 aa15.32■□□□□ 0.04
CDHR4-201ENST00000343366 C6orf62Q9GZU0 229 aaPredicted RBP15.32■□□□□ 0.04
CDHR4-201ENST00000343366 KIAA2026Q5HYC2 2103 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms