RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 LIN7CQ9NUP9 197 aaKnown RBP10.77□□□□□ -0.68
SNRNP48-201ENST00000342415 TANC1Q9C0D5 1861 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 NGFP01138 241 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 CRYAAP02489 173 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 GAPDHP04406 335 aaKnown RBP10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 CD63P08962 238 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 LIFP15018 202 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 TMEM241Q24JQ0 296 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 ACTR3CQ9C0K3 210 aaPredicted RBP10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 TMEM38BQ9NVV0 291 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 BTBD17A6NE02 478 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 TRDCB7Z8K6 153 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 OR8U8P0C7N1 319 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 ADCYAP1P18509 176 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 COX5AP20674 150 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 PACRGQ96M98 296 aaPredicted RBP10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 LOXL2Q9Y4K0 774 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 PLXNA4Q9HCM2 1894 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 EFNA2O43921 213 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 LYZL6O75951 148 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 ACAA1P09110 424 aaPredicted RBP10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 PRF1P14222 555 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 GALR1P47211 349 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 RPL29P47914 159 aaKnown RBP10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 ENDOGQ14249 297 aaKnown RBP10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 MRGPRDQ8TDS7 321 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 HIPK2Q9H2X6 1198 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 MYOZ1Q9NP98 299 aaPredicted RBP10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 ZNF581Q9P0T4 197 aa10.77□□□□□ -0.69
SNRNP48-201ENST00000342415 RANBP2P49792 3224 aaKnown RBP10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 C3orf80F5H4A9 247 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 H0Y8G0 127 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 MT-CO2P00403 227 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 RPS2P15880 293 aaKnown RBP10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 RBM11P57052 281 aaKnown RBP10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 SUPT4H1P63272 117 aaKnown RBP10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 FAM27BQ5VT28 67 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 WDR74Q6RFH5 385 aaPredicted RBP10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 KCNE4Q8WWG9 221 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 Q96M66 194 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 OR2D2Q9H210 308 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 RYDENQ9NUL5 291 aaKnown RBP10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 SYNGR1O43759 233 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 DTYMKP23919 212 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 SLC10A1Q14973 349 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 HIKESHIQ53FT3 197 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 ASPHD2Q6ICH7 369 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 PPP1R35Q8TAP8 253 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 GALMQ96C23 342 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 UHRF2Q96PU4 802 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 B3GAT1Q9P2W7 334 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 CARHSP1Q9Y2V2 147 aaKnown RBP10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 A0A0U1RQV5 110 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 A0A1W2PQM1 296 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 LRP5LA4QPB2 252 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 SEC14L6B5MCN3 397 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 SPINT2O43291 252 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 CDS2O95674 445 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 DANCRP0C864 163 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 PGA5P0DJD9 388 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 POC1BQ8TC44 478 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 IL22RA2Q969J5 263 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 ATP5SQ99766 215 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 GPR35Q9HC97 309 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 MTCH1Q9NZJ7 389 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 PSG11Q9UQ72 335 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 POLDIP2Q9Y2S7 368 aa10.76□□□□□ -0.69
SNRNP48-201ENST00000342415 CREBBPQ92793 2442 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 UNC80Q8N2C7 3258 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 BSXQ3C1V8 233 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 PHYHD1Q5SRE7 291 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 OR10G4Q8NGN3 311 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 OR10G9Q8NGN4 311 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 OR10G7Q8NGN6 311 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 MAFAQ8NHW3 353 aaPredicted RBP10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 PINX1Q96BK5 328 aaKnown RBP10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 RAB40CQ96S21 281 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 ZDHHC11Q9H8X9 412 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 GSN-AS1Q9NRJ2 163 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 FUT9Q9Y231 359 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 SNRPCP09234 159 aaKnown RBP10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 Q3ZCU0 254 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 FAM78BQ5VT40 261 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 FAM166AQ6J272 317 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 DHRS13Q6UX07 377 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 CALHM1Q8IU99 346 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 TMEM18Q96B42 140 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 TWSG1Q9GZX9 223 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 IL36RNQ9UBH0 155 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 SRD5A2P31213 254 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 GPR12P47775 334 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 THSD7BQ9C0I4 1608 aa10.75□□□□□ -0.69
SNRNP48-201ENST00000342415 IFI6P09912 130 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 G6PCP35575 357 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 CFHR1Q03591 330 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 IL24Q13007 206 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 TMEM187Q14656 261 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 SRXN1Q9BYN0 137 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 KLRC4-KLRK1H3BQV0 150 aa10.74□□□□□ -0.69
SNRNP48-201ENST00000342415 OR7C2O60412 319 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms