RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 Q9N2K0 584 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 KCNIP1Q9NZI2 227 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 ABCA1O95477 2261 aa8.63□□□□□ -1.03
RBFOX1-202ENST00000340209 PTPRBP23467 1997 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 CRYM-AS1A6NIL9 109 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 TRDCB7Z8K6 153 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 CRYABP02511 175 aaKnown RBP8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 IAPPP10997 89 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 SSTR5P35346 364 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 ZNF816Q0VGE8 651 aaPredicted RBP8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 SPRNQ5BIV9 151 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 TMEM211Q6ICI0 200 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 CCDC28AQ8IWP9 274 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 LGI3Q8N145 548 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 OR52L2PQ8NGH6 319 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 RBPMSQ93062 196 aaKnown RBP8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 LINC00052Q96N35 136 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 TREM1Q9NP99 234 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 RCL1Q9Y2P8 373 aaKnown RBP8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 LRBAP50851 2863 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 IGKV1-6A0A0C4DH72 117 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 PSPNO60542 156 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 PPP1CCP36873 323 aaKnown RBP8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 UBA52P62987 128 aaKnown RBP8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 FAHD2BQ6P2I3 314 aaPredicted RBP8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 C22orf34Q6ZV56 151 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 BSCL2Q96G97 398 aaPredicted RBP8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 FAHD2AQ96GK7 314 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 TAAR3PQ9P1P4 343 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 PRELID1Q9Y255 219 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 FAM208BQ5VWN6 2430 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 TSPAN4O14817 238 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 MPPED1O15442 326 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 EIF3GO75821 320 aaKnown RBP eCLIP8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 OR2F2O95006 317 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 PET100P0DJ07 73 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 RAC2P15153 192 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 S100GP29377 79 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 GLIPR1P48060 266 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 OR2F1Q13607 317 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 CLLU1Q5K131 121 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 SSX9Q7RTT3 188 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 KCNRGQ8N5I3 272 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 MRPL30Q8TCC3 161 aaKnown RBP8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 OR2V2Q96R30 315 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 RNF126Q9BV68 326 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 FBXL17Q9UF56 701 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 ATPIF1Q9UII2 106 aa8.62□□□□□ -1.03
RBFOX1-202ENST00000340209 KMT2EQ8IZD2 1858 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 LRP5LA4QPB2 252 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 FAM24AA6NFZ4 105 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 RRP8O43159 456 aaKnown RBP8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 PTBP3O95758 552 aaKnown RBP8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 PSG2P11465 335 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 NFYBP25208 207 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 CD80P33681 288 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 NAAAQ02083 359 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 GNMTQ14749 295 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 SLC38A6Q8IZM9 456 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 ZNRF1Q8ND25 227 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 GLYATL2Q8WU03 294 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 SUCNR1Q9BXA5 334 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 OPA3Q9H6K4 179 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 SPACA1Q9HBV2 294 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 GNG12Q9UBI6 72 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 ATP23Q9Y6H3 246 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 TPT1P13693 172 aaKnown RBP8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 Q6ZR03 302 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 OR8G5Q8NG78 346 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 MOB3AQ96BX8 217 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 RFNGQ9Y644 331 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 TACC2O95359 2948 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 CHD3Q12873 2000 aaKnown RBP8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 GPR31O00270 319 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 ABCD4O14678 606 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 MED6O75586 246 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 CD8AP01732 235 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 MBPP02686 304 aaPredicted RBP8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 RPS2P15880 293 aaKnown RBP8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 M6PRP20645 277 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 NHLH2Q02577 135 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 COL10A1Q03692 680 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 RTP5Q14D33 572 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 DAZAP2Q15038 168 aaPredicted RBP8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 SWI5Q1ZZU3 235 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 MPV17LQ2QL34 196 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 CXorf66Q5JRM2 361 aaPredicted RBP8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 LIAT1Q6ZQX7 453 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 Q6ZS92 163 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 OR1S2Q8NGQ3 325 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 ITLN1Q8WWA0 313 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 ARL11Q969Q4 196 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 ABHD14BQ96IU4 210 aa8.61□□□□□ -1.03
RBFOX1-202ENST00000340209 C1QL1O75973 258 aa8.6□□□□□ -1.03
RBFOX1-202ENST00000340209 P2RX3P56373 397 aa8.6□□□□□ -1.03
RBFOX1-202ENST00000340209 HLA-DRB3P79483 266 aa8.6□□□□□ -1.03
RBFOX1-202ENST00000340209 NHLRC3Q5JS37 347 aa8.6□□□□□ -1.03
RBFOX1-202ENST00000340209 KRBOX4Q5JUW0 171 aa8.6□□□□□ -1.03
RBFOX1-202ENST00000340209 PRSS54Q6PEW0 395 aa8.6□□□□□ -1.03
RBFOX1-202ENST00000340209 ERGIC1Q969X5 290 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms