RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 ZNF184Q99676 751 aaPredicted RBP15.43■□□□□ 0.06
ITGA4-202ENST00000339307 NCOR1P1Q9H4R4 102 aa15.43■□□□□ 0.06
ITGA4-202ENST00000339307 TMEM138Q9NPI0 162 aa15.43■□□□□ 0.06
ITGA4-202ENST00000339307 A0A1W2PPI3 338 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 FAM90A18PA6NE21 464 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 FAM90A16PA6NEW6 464 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 FAM90A20PA6NIJ5 464 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 FAM90A9PA6NNJ1 464 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 FAM90A12PA8MX19 464 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 FAM90A5PA8MXJ8 464 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 NPIPB11E5RHQ5 1161 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 FAM90A15PP0C7V4 464 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 FAM90A13PP0C7W8 464 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 FAM90A14PP0C7W9 464 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 FAM90A24PP0C7X0 464 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 CCDC58Q4VC31 144 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 ZNF529Q6P280 563 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 OR51D1Q8NGF3 324 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 Q9H521 79 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 FGF20Q9NP95 211 aaPredicted RBP15.42■□□□□ 0.06
ITGA4-202ENST00000339307 PLCXD1Q9NUJ7 323 aa15.42■□□□□ 0.06
ITGA4-202ENST00000339307 IGHV3-72A0A0B4J1Y9 119 aa15.41■□□□□ 0.06
ITGA4-202ENST00000339307 TMEM30CPA0ZSE6 113 aa15.41■□□□□ 0.06
ITGA4-202ENST00000339307 NCBP2LA6PVI3 153 aaKnown RBP15.41■□□□□ 0.06
ITGA4-202ENST00000339307 CCRL2O00421 344 aa15.41■□□□□ 0.06
ITGA4-202ENST00000339307 SDCBPO00560 298 aaPredicted RBP15.41■□□□□ 0.06
ITGA4-202ENST00000339307 HSD17B6O14756 317 aa15.41■□□□□ 0.06
ITGA4-202ENST00000339307 GEMIN2O14893 280 aaKnown RBP15.41■□□□□ 0.06
ITGA4-202ENST00000339307 DUS4LO95620 317 aaKnown RBP15.41■□□□□ 0.06
ITGA4-202ENST00000339307 MYL12AP19105 171 aa15.41■□□□□ 0.06
ITGA4-202ENST00000339307 GZMHP20718 246 aa15.41■□□□□ 0.06
ITGA4-202ENST00000339307 MYF6P23409 242 aa15.41■□□□□ 0.06
ITGA4-202ENST00000339307 BDKRB2P30411 391 aa15.41■□□□□ 0.06
ITGA4-202ENST00000339307 HOXD3P31249 432 aaPredicted RBP15.41■□□□□ 0.06
ITGA4-202ENST00000339307 RBM11P57052 281 aaKnown RBP15.41■□□□□ 0.06
ITGA4-202ENST00000339307 SLC22A6Q4U2R8 563 aa15.41■□□□□ 0.06
ITGA4-202ENST00000339307 ASCL4Q6XD76 172 aa15.41■□□□□ 0.06
ITGA4-202ENST00000339307 OR8H3Q8N146 312 aa15.41■□□□□ 0.06
ITGA4-202ENST00000339307 C5orf56Q8N8D9 126 aa15.41■□□□□ 0.06
ITGA4-202ENST00000339307 OR10A7Q8NGE5 316 aa15.41■□□□□ 0.06
ITGA4-202ENST00000339307 CHPT1Q8WUD6 406 aa15.41■□□□□ 0.06
ITGA4-202ENST00000339307 ARL11Q969Q4 196 aa15.41■□□□□ 0.06
ITGA4-202ENST00000339307 PAK1IP1Q9NWT1 392 aaPredicted RBP15.41■□□□□ 0.06
ITGA4-202ENST00000339307 GAPDHP04406 335 aaKnown RBP15.4■□□□□ 0.06
ITGA4-202ENST00000339307 DCKP27707 260 aa15.4■□□□□ 0.06
ITGA4-202ENST00000339307 SLC35B1P78383 322 aa15.4■□□□□ 0.06
ITGA4-202ENST00000339307 SLC16A12Q6ZSM3 486 aa15.4■□□□□ 0.06
ITGA4-202ENST00000339307 SLC35E3Q7Z769 313 aa15.4■□□□□ 0.06
ITGA4-202ENST00000339307 OR13C5Q8NGS8 318 aa15.4■□□□□ 0.06
ITGA4-202ENST00000339307 DPF1Q92782 380 aa15.4■□□□□ 0.06
ITGA4-202ENST00000339307 LINC00574Q9H8X3 128 aa15.4■□□□□ 0.06
ITGA4-202ENST00000339307 CHCHD3Q9NX63 227 aaKnown RBP15.4■□□□□ 0.06
ITGA4-202ENST00000339307 CKLFQ9UBR5 152 aa15.4■□□□□ 0.06
ITGA4-202ENST00000339307 ZNF281Q9Y2X9 895 aa15.4■□□□□ 0.06
ITGA4-202ENST00000339307 IGHV3-43A0A0B4J1X8 118 aa15.39■□□□□ 0.05
ITGA4-202ENST00000339307 IGHV3-43DP0DP04 118 aa15.39■□□□□ 0.05
ITGA4-202ENST00000339307 FOXRED2Q8IWF2 684 aa15.39■□□□□ 0.05
ITGA4-202ENST00000339307 STX19Q8N4C7 294 aa15.39■□□□□ 0.05
ITGA4-202ENST00000339307 Q8NFD4 153 aa15.39■□□□□ 0.05
ITGA4-202ENST00000339307 BABAM2Q9NXR7 383 aa15.39■□□□□ 0.05
ITGA4-202ENST00000339307 CNOT2Q9NZN8 540 aaKnown RBP15.39■□□□□ 0.05
ITGA4-202ENST00000339307 SIRT4Q9Y6E7 314 aaPredicted RBP15.39■□□□□ 0.05
ITGA4-202ENST00000339307 EFCAB10A6NFE3 127 aa15.38■□□□□ 0.05
ITGA4-202ENST00000339307 K7EIL1 84 aa15.38■□□□□ 0.05
ITGA4-202ENST00000339307 FGF16O43320 207 aa15.38■□□□□ 0.05
ITGA4-202ENST00000339307 GTF2F2P13984 249 aa15.38■□□□□ 0.05
ITGA4-202ENST00000339307 KRTAP10-11P60412 298 aa15.38■□□□□ 0.05
ITGA4-202ENST00000339307 RPL23AP62750 156 aaKnown RBP15.38■□□□□ 0.05
ITGA4-202ENST00000339307 C8orf86Q6ZUL3 223 aa15.38■□□□□ 0.05
ITGA4-202ENST00000339307 MRPL41Q8IXM3 137 aaKnown RBP15.38■□□□□ 0.05
ITGA4-202ENST00000339307 LINC00482Q8N8I6 264 aa15.38■□□□□ 0.05
ITGA4-202ENST00000339307 IL36GQ9NZH8 169 aa15.38■□□□□ 0.05
ITGA4-202ENST00000339307 IGHV1-3A0A0C4DH29 117 aa15.37■□□□□ 0.05
ITGA4-202ENST00000339307 A0A1W2PP11 408 aa15.37■□□□□ 0.05
ITGA4-202ENST00000339307 AIPO00170 330 aa15.37■□□□□ 0.05
ITGA4-202ENST00000339307 DENRO43583 198 aaKnown RBP15.37■□□□□ 0.05
ITGA4-202ENST00000339307 ZNF780AO75290 641 aaPredicted RBP15.37■□□□□ 0.05
ITGA4-202ENST00000339307 PAX5Q02548 391 aa15.37■□□□□ 0.05
ITGA4-202ENST00000339307 MED21Q13503 144 aa15.37■□□□□ 0.05
ITGA4-202ENST00000339307 C6orf141Q5SZD1 244 aa15.37■□□□□ 0.05
ITGA4-202ENST00000339307 C18orf65Q6ZTR6 163 aa15.37■□□□□ 0.05
ITGA4-202ENST00000339307 LINC00596Q86U02 117 aa15.37■□□□□ 0.05
ITGA4-202ENST00000339307 PRR18Q8N4B5 295 aa15.37■□□□□ 0.05
ITGA4-202ENST00000339307 JAGN1Q8N5M9 183 aa15.37■□□□□ 0.05
ITGA4-202ENST00000339307 ZFP41Q8N8Y5 198 aa15.37■□□□□ 0.05
ITGA4-202ENST00000339307 KLHL30-AS1Q8NEE0 82 aa15.37■□□□□ 0.05
ITGA4-202ENST00000339307 GHSRQ92847 366 aa15.37■□□□□ 0.05
ITGA4-202ENST00000339307 SMIM19Q96E16 107 aa15.37■□□□□ 0.05
ITGA4-202ENST00000339307 EXOSC1Q9Y3B2 195 aaKnown RBP15.37■□□□□ 0.05
ITGA4-202ENST00000339307 A0A1W2PPK0 400 aa15.36■□□□□ 0.05
ITGA4-202ENST00000339307 WI2-2373I1.2A0A1W2PRP0 233 aa15.36■□□□□ 0.05
ITGA4-202ENST00000339307 OGG1O15527 345 aa15.36■□□□□ 0.05
ITGA4-202ENST00000339307 IL3RAP26951 378 aa15.36■□□□□ 0.05
ITGA4-202ENST00000339307 RAB25P57735 213 aa15.36■□□□□ 0.05
ITGA4-202ENST00000339307 ZNF816Q0VGE8 651 aaPredicted RBP15.36■□□□□ 0.05
ITGA4-202ENST00000339307 MPV17LQ2QL34 196 aa15.36■□□□□ 0.05
ITGA4-202ENST00000339307 NHLRC3Q5JS37 347 aa15.36■□□□□ 0.05
ITGA4-202ENST00000339307 FAM53AQ6NSI3 398 aaPredicted RBP15.36■□□□□ 0.05
ITGA4-202ENST00000339307 OR2W3Q7Z3T1 314 aa15.36■□□□□ 0.05
ITGA4-202ENST00000339307 TMEM80Q96HE8 168 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms