RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 IGHV1-8P0DP01 117 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 SRP14P37108 136 aaKnown RBP12.6□□□□□ -0.39
SEC13-201ENST00000337354 GLP1RP43220 463 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 PITPNAQ00169 270 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 CDNFQ49AH0 187 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 GPR157Q5UAW9 335 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 OR4K15Q8NH41 348 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 MRPL30Q8TCC3 161 aaKnown RBP12.6□□□□□ -0.39
SEC13-201ENST00000337354 MRGPRDQ8TDS7 321 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 TNFRSF14Q92956 283 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 CMSS1Q9BQ75 279 aaKnown RBP12.6□□□□□ -0.39
SEC13-201ENST00000337354 C12orf4Q9NQ89 552 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 KCNIP1Q9NZI2 227 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 NUP50Q9UKX7 468 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 MGAT4AQ9UM21 535 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 NF1P21359 2839 aa12.6□□□□□ -0.39
SEC13-201ENST00000337354 A0A075B6Q4 140 aa12.59□□□□□ -0.39
SEC13-201ENST00000337354 CENPVL3A0A0U1RRI6 287 aa12.59□□□□□ -0.39
SEC13-201ENST00000337354 CLPXO76031 633 aa12.59□□□□□ -0.39
SEC13-201ENST00000337354 CD3GP09693 182 aa12.59□□□□□ -0.39
SEC13-201ENST00000337354 GNB3P16520 340 aa12.59□□□□□ -0.39
SEC13-201ENST00000337354 PNLIPRP3Q17RR3 467 aa12.59□□□□□ -0.39
SEC13-201ENST00000337354 C17orf58Q2M2W7 97 aa12.59□□□□□ -0.39
SEC13-201ENST00000337354 ZNF260Q3ZCT1 412 aa12.59□□□□□ -0.39
SEC13-201ENST00000337354 OR13D1Q8NGV5 346 aa12.59□□□□□ -0.39
SEC13-201ENST00000337354 CCDC107Q8WV48 283 aa12.59□□□□□ -0.39
SEC13-201ENST00000337354 CHMP1AQ9HD42 196 aaPredicted RBP12.59□□□□□ -0.39
SEC13-201ENST00000337354 SIRT7Q9NRC8 400 aa12.59□□□□□ -0.39
SEC13-201ENST00000337354 CALYQ9NYX4 217 aa12.59□□□□□ -0.39
SEC13-201ENST00000337354 SESN1Q9Y6P5 492 aa12.59□□□□□ -0.39
SEC13-201ENST00000337354 TRAV18A0A075B6X5 111 aa12.58□□□□□ -0.4
SEC13-201ENST00000337354 MEX3AA1L020 520 aaKnown RBP12.58□□□□□ -0.4
SEC13-201ENST00000337354 SPINT2O43291 252 aa12.58□□□□□ -0.4
SEC13-201ENST00000337354 MELTFP08582 738 aa12.58□□□□□ -0.4
SEC13-201ENST00000337354 CDK2P24941 298 aa12.58□□□□□ -0.4
SEC13-201ENST00000337354 MNDAP41218 407 aa12.58□□□□□ -0.4
SEC13-201ENST00000337354 UBE2E1P51965 193 aa12.58□□□□□ -0.4
SEC13-201ENST00000337354 ARFRP1Q13795 201 aa12.58□□□□□ -0.4
SEC13-201ENST00000337354 SRSF7Q16629 238 aaKnown RBP eCLIP12.58□□□□□ -0.4
SEC13-201ENST00000337354 TMEM30BQ3MIR4 351 aa12.58□□□□□ -0.4
SEC13-201ENST00000337354 KLF17Q5JT82 389 aaPredicted RBP12.58□□□□□ -0.4
SEC13-201ENST00000337354 HACD4Q5VWC8 232 aa12.58□□□□□ -0.4
SEC13-201ENST00000337354 ZNF880Q6PDB4 577 aa12.58□□□□□ -0.4
SEC13-201ENST00000337354 MOB1BQ7L9L4 216 aa12.58□□□□□ -0.4
SEC13-201ENST00000337354 LHX4Q969G2 390 aa12.58□□□□□ -0.4
SEC13-201ENST00000337354 ARL11Q969Q4 196 aa12.58□□□□□ -0.4
SEC13-201ENST00000337354 SLIRPQ9GZT3 109 aaKnown RBP12.58□□□□□ -0.4
SEC13-201ENST00000337354 ZMAT3Q9HA38 289 aaKnown RBP12.58□□□□□ -0.4
SEC13-201ENST00000337354 BATF3Q9NR55 127 aa12.58□□□□□ -0.4
SEC13-201ENST00000337354 NAV3Q8IVL0 2385 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 A0A087X0M5 115 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 A0A1B0GX30 115 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 C15orf65H3BRN8 121 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 HPGDSO60760 199 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 TPPPO94811 219 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 SRD5A1P18405 259 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 RCC1P18754 421 aaPredicted RBP12.57□□□□□ -0.4
SEC13-201ENST00000337354 FPR2P25090 351 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 TALDO1P37837 337 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 IL17RELQ6ZVW7 336 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 RTN4RL2Q86UN3 420 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 OR52M1Q8NGK5 317 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 TMEM133Q9H2Q1 129 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 TAF9BQ9HBM6 251 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 IDI2-AS1Q9NZ38 188 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 ADAM30Q9UKF2 790 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 A3GALT2U3KPV4 340 aa12.57□□□□□ -0.4
SEC13-201ENST00000337354 TRAV39A0A0B4J263 110 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 TRAV40A0A0B4J280 105 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 IGHV1-69DA0A0B4J2H0 117 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 C12orf77C9JDV5 145 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 RNASEK-C17orf49H0YIS7 233 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 IGHV1-69P01742 117 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 EIF4EP06730 217 aaKnown RBP12.56□□□□□ -0.4
SEC13-201ENST00000337354 FAM157CP0CG43 387 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 ELK1P19419 428 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 DTYMKP23919 212 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 SSTR5P35346 364 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 TMEM69Q5SWH9 247 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 OLFML2AQ68BL7 652 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 C9orf139Q6ZV77 190 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 OR11H6Q8NGC7 330 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 RFESDQ8TAC1 157 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 GALMQ96C23 342 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 KIRREL1Q96J84 757 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 NXF2Q9GZY0 626 aaKnown RBP12.56□□□□□ -0.4
SEC13-201ENST00000337354 AUNIPQ9H7T9 357 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 Q9N2K0 584 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 A6NHS1 94 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 FAM25AB3EWG3 89 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 FAM25CB3EWG5 89 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 FAM25GB3EWG6 89 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 F2RL2O00254 374 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 RGS5O15539 181 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 MMP23AO75900 390 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 HBZP02008 142 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 IGHV4-38-2P0DP08 117 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 OMGP23515 440 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 CD34P28906 385 aa12.56□□□□□ -0.4
SEC13-201ENST00000337354 GNG2P59768 71 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms