RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 H1FOOQ8IZA3 346 aaPredicted RBP11.58□□□□□ -0.56
COL2A1-201ENST00000337299 GINS3Q9BRX5 216 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 SOX7Q9BT81 388 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 SIT1Q9Y3P8 196 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 DOCK9Q9BZ29 2069 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 SCN10AQ9Y5Y9 1956 aa11.58□□□□□ -0.56
COL2A1-201ENST00000337299 DHHO43323 396 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 CTXN2P0C2S0 81 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 LHFPL2Q6ZUX7 228 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 DMRTC2Q8IXT2 367 aaPredicted RBP11.57□□□□□ -0.56
COL2A1-201ENST00000337299 RPRMQ9NS64 109 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 HEATR1Q9H583 2144 aaKnown RBP11.57□□□□□ -0.56
COL2A1-201ENST00000337299 PDCD11Q14690 1871 aaKnown RBP11.57□□□□□ -0.56
COL2A1-201ENST00000337299 A0A096LPE4 126 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 A0A1W2PPZ6 126 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 PITX3O75364 302 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 EDDM3AQ14507 147 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 ACSM6Q6P461 480 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 MRGPRFQ96AM1 343 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 RTBDNQ9BSG5 229 aaPredicted RBP11.57□□□□□ -0.56
COL2A1-201ENST00000337299 CFHR5Q9BXR6 569 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 SRD5A3Q9H8P0 318 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 HDGFL3Q9Y3E1 203 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 ARHGEF17Q96PE2 2063 aaPredicted RBP11.57□□□□□ -0.56
COL2A1-201ENST00000337299 PLXNB2O15031 1838 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 SBF1O95248 1867 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 AMBPP02760 352 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 BGLAPP02818 100 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 LSM6P62312 80 aaKnown RBP11.57□□□□□ -0.56
COL2A1-201ENST00000337299 MST1LQ2TV78 715 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 OR4A47Q6IF82 309 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 ZNF664Q8N3J9 261 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 ANAPC16Q96DE5 110 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 FAM173AQ9BQD7 235 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 HIPK2Q9H2X6 1198 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 FOXD3Q9UJU5 478 aaPredicted RBP11.57□□□□□ -0.56
COL2A1-201ENST00000337299 MMP17Q9ULZ9 603 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 RBBP6Q7Z6E9 1792 aaKnown RBP11.57□□□□□ -0.56
COL2A1-201ENST00000337299 RTN4RL2Q86UN3 420 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 OR1L6Q8NGR2 347 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 ST8SIA1Q92185 356 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 TMEM230Q96A57 120 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 ACY3Q96HD9 319 aa11.57□□□□□ -0.56
COL2A1-201ENST00000337299 UBE2ZQ9H832 354 aaPredicted RBP11.57□□□□□ -0.56
COL2A1-201ENST00000337299 CRYM-AS1A6NIL9 109 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 TRDCB7Z8K6 153 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 BMPR1BO00238 502 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 GRPP07492 148 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 FOXL2P58012 376 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 PCBD1P61457 104 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 GPR27Q9NS67 375 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 PTRH2Q9Y3E5 179 aaKnown RBP11.56□□□□□ -0.56
COL2A1-201ENST00000337299 RRP8O43159 456 aaKnown RBP11.56□□□□□ -0.56
COL2A1-201ENST00000337299 GPM6AP51674 278 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 TCTAP57738 103 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 ROM1Q03395 351 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 MANBALQ9NQG1 85 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 MRPL33O75394 65 aaKnown RBP11.56□□□□□ -0.56
COL2A1-201ENST00000337299 CBR3O75828 277 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 OR4A8P0C604 315 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 HLA-GP17693 338 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 FOXK1P85037 733 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 LYSMD4Q5XG99 296 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 CARFQ8N187 725 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 ABI3Q9P2A4 366 aa11.56□□□□□ -0.56
COL2A1-201ENST00000337299 IGSF23A1L1A6 192 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 NDUFB4O95168 129 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 SFTPCP11686 197 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 FCER1GP30273 86 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 OR1D5P58170 312 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 ATP6V1FQ16864 119 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 OR10V1Q8NGI7 309 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 ASB10Q8WXI3 467 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 CORO2AQ92828 525 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 OXGR1Q96P68 337 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 C2orf88Q9BSF0 95 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 IGLV1-36A0A0B4J1U3 117 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 LOC102723971A0A1B0GUV8 181 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 DLEU1O43261 78 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 CEACAM1P13688 526 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 MPLP40238 635 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 SCGB2A2Q13296 93 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 ZNF774Q6NX45 483 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 IFI44Q8TCB0 444 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 RHBDD1Q8TEB9 315 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 SPSB1Q96BD6 273 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 PHF7Q9BWX1 381 aaPredicted RBP11.55□□□□□ -0.56
COL2A1-201ENST00000337299 OR2J1Q9GZK6 312 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 OBP2BQ9NPH6 170 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 LIN7CQ9NUP9 197 aaKnown RBP11.55□□□□□ -0.56
COL2A1-201ENST00000337299 TECRQ9NZ01 308 aaKnown RBP11.55□□□□□ -0.56
COL2A1-201ENST00000337299 STARD10Q9Y365 291 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 ABCA7Q8IZY2 2146 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 LCTP09848 1927 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 K7ERU9 68 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 ZNHIT1O43257 154 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 GLB1P16278 677 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 HOXA6P31267 233 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 FGF11Q92914 225 aa11.55□□□□□ -0.56
COL2A1-201ENST00000337299 GPX7Q96SL4 187 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms