RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 GAPTQ8N292 157 aa10.68□□□□□ -0.7
LIMK1-201ENST00000336180 CCDC54Q8NEL0 328 aa10.68□□□□□ -0.7
LIMK1-201ENST00000336180 TMED6Q8WW62 240 aa10.68□□□□□ -0.7
LIMK1-201ENST00000336180 SSX3Q99909 188 aa10.68□□□□□ -0.7
LIMK1-201ENST00000336180 MYOZ1Q9NP98 299 aaPredicted RBP10.68□□□□□ -0.7
LIMK1-201ENST00000336180 IGHV3OR15-7A0A075B7D8 119 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 IGHV1-18A0A0C4DH31 117 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 EPHA1P21709 976 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 Q6ZR03 302 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 ZNF818PQ6ZRF7 136 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 ZNF573Q86YE8 665 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 ZCCHC24Q8N2G6 241 aaKnown RBP10.67□□□□□ -0.7
LIMK1-201ENST00000336180 RFESDQ8TAC1 157 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 RBPMSQ93062 196 aaKnown RBP10.67□□□□□ -0.7
LIMK1-201ENST00000336180 RBM7Q9Y580 266 aaKnown RBP10.67□□□□□ -0.7
LIMK1-201ENST00000336180 OR2H2O95918 312 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 LINC00205P59089 165 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 MRPL49Q13405 166 aaKnown RBP10.67□□□□□ -0.7
LIMK1-201ENST00000336180 RBMS3Q6XE24 437 aaKnown RBP10.67□□□□□ -0.7
LIMK1-201ENST00000336180 SLC5A7Q9GZV3 580 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 SHARPINQ9H0F6 387 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 RFNGQ9Y644 331 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 A0A1B0GV50 99 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 FBXO24O75426 580 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 DEFA6Q01524 100 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 TMEM268Q5VZI3 342 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 OR2Z1Q8NG97 314 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 WNT2BQ93097 391 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 Q9N2K0 584 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 PPP1R3CQ9UQK1 317 aa10.67□□□□□ -0.7
LIMK1-201ENST00000336180 ABCA4P78363 2273 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 IGHV3-43A0A0B4J1X8 118 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 CRYM-AS1A6NIL9 109 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 PSPNO60542 156 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 SLC34A2O95436 690 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 IGHV3-43DP0DP04 118 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 S100PP25815 95 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 GNRHRP30968 328 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 EDDM3AQ14507 147 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 ACOT7LQ6ZUV0 252 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 BHLHA15Q7RTS1 189 aaPredicted RBP10.66□□□□□ -0.7
LIMK1-201ENST00000336180 RTL8AQ9BWD3 113 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 ERRFI1Q9UJM3 462 aaPredicted RBP10.66□□□□□ -0.7
LIMK1-201ENST00000336180 TRAPPC2LQ9UL33 140 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 AUP1Q9Y679 476 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 A6NJY4 79 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 DEFB108AA8MXU0 73 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 HSPA12AO43301 675 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 CNOT4O95628 575 aaKnown RBP10.66□□□□□ -0.7
LIMK1-201ENST00000336180 S100A9P06702 114 aaKnown RBP10.66□□□□□ -0.7
LIMK1-201ENST00000336180 CTSDP07339 412 aaPredicted RBP10.66□□□□□ -0.7
LIMK1-201ENST00000336180 OMGP23515 440 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 DTYMKP23919 212 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 NUP62P37198 522 aaPredicted RBP10.66□□□□□ -0.7
LIMK1-201ENST00000336180 ID4P47928 161 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 AESQ08117 197 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 RTP5Q14D33 572 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 CLLU1Q5K131 121 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 TBC1D26Q86UD7 250 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 MRPL30Q8TCC3 161 aaKnown RBP10.66□□□□□ -0.7
LIMK1-201ENST00000336180 SCGB3A2Q96PL1 93 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 OR51M1Q9H341 326 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 NAA60Q9H7X0 242 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 IL36GQ9NZH8 169 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 KCNS2Q9ULS6 477 aa10.66□□□□□ -0.7
LIMK1-201ENST00000336180 SPTAN1Q13813 2472 aaKnown RBP10.66□□□□□ -0.7
LIMK1-201ENST00000336180 SPRY3O43610 288 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 ARL6IP1Q15041 203 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 TGIF2LYQ8IUE0 185 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 KCNRGQ8N5I3 272 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 SLC35G3Q8N808 338 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 POC1AQ8NBT0 407 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 GLYATL2Q8WU03 294 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 NARS2Q96I59 477 aaKnown RBP10.65□□□□□ -0.7
LIMK1-201ENST00000336180 MPC1Q9Y5U8 109 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 TK1P04183 234 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 FGL1Q08830 312 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 FAHD2BQ6P2I3 314 aaPredicted RBP10.65□□□□□ -0.7
LIMK1-201ENST00000336180 OR6K3Q8NGY3 331 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 MRPS24Q96EL2 167 aaKnown RBP10.65□□□□□ -0.7
LIMK1-201ENST00000336180 FAHD2AQ96GK7 314 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 C2orf50Q96LR7 162 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 PARD6GQ9BYG4 376 aaPredicted RBP10.65□□□□□ -0.7
LIMK1-201ENST00000336180 ASF1BQ9NVP2 202 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 C1orf123Q9NWV4 160 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 SDHAF2Q9NX18 166 aa10.65□□□□□ -0.7
LIMK1-201ENST00000336180 PURGQ9UJV8 347 aaKnown RBP10.65□□□□□ -0.7
LIMK1-201ENST00000336180 UBE2J1Q9Y385 318 aaPredicted RBP10.65□□□□□ -0.7
LIMK1-201ENST00000336180 CHD3Q12873 2000 aaKnown RBP10.65□□□□□ -0.7
LIMK1-201ENST00000336180 IGHV2OR16-5A0A0B4J2B6 119 aa10.65□□□□□ -0.71
LIMK1-201ENST00000336180 H7C2Y5 167 aa10.65□□□□□ -0.71
LIMK1-201ENST00000336180 J3QT63 122 aa10.65□□□□□ -0.71
LIMK1-201ENST00000336180 SLC31A2O15432 143 aa10.65□□□□□ -0.71
LIMK1-201ENST00000336180 BCL2L11O43521 198 aa10.65□□□□□ -0.71
LIMK1-201ENST00000336180 HNF4GQ14541 408 aa10.65□□□□□ -0.71
LIMK1-201ENST00000336180 GUSBP1Q15486 140 aa10.65□□□□□ -0.71
LIMK1-201ENST00000336180 RPL7L1Q6DKI1 246 aaKnown RBP10.65□□□□□ -0.71
LIMK1-201ENST00000336180 ATRAIDQ6UW56 229 aa10.65□□□□□ -0.71
LIMK1-201ENST00000336180 DHRS11Q6UWP2 260 aa10.65□□□□□ -0.71
LIMK1-201ENST00000336180 C2CD4CQ8TF44 421 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms