RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 ICOSLGO75144 302 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 IGF2P01344 180 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 CD300LDQ6UXZ3 194 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 MOGAT3Q86VF5 341 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 FAM219AQ8IW50 185 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 OR1N1Q8NGS0 311 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 HHIPQ96QV1 700 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 MAP1LC3AQ9H492 121 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 SLC52A3Q9NQ40 469 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 ONECUT1Q9UBC0 465 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 ATP23Q9Y6H3 246 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 MPTX1A8MV57 137 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 NPPBP16860 134 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 TTC9BQ8N6N2 239 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 OR4C13Q8NGP0 309 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 RPS20P60866 119 aaKnown RBP5.48□□□□□ -1.53
CSMD1-201ENST00000335551 PAPPA-AS1Q5QFB9 102 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 RGS7BPQ6MZT1 257 aaPredicted RBP5.48□□□□□ -1.53
CSMD1-201ENST00000335551 PTX4Q96A99 478 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF665Q9H7R5 613 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 PRNDQ9UKY0 176 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 LOC389332A0A1B0GUA5 103 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 CD300CQ08708 224 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 SPANXN1Q5VSR9 72 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 FADS6Q8N9I5 356 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 Q8WTZ3 238 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 CLEC5AQ9NY25 188 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 DAPP1Q9UN19 280 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 F11RQ9Y624 299 aaKnown RBP5.48□□□□□ -1.53
CSMD1-201ENST00000335551 TRGC2P03986 189 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 MICBQ29980 383 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 METRNLQ641Q3 311 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 ANKRD37Q7Z713 158 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 TMEM45BQ96B21 275 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 KCPQ6ZWJ8 1503 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 A0A0B4J2E0 115 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 A0A1B0GX12 115 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 M0R1B8 84 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 LYPD8Q6UX82 237 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 TMEFF1Q8IYR6 380 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF418Q8TF45 676 aaPredicted RBP5.48□□□□□ -1.53
CSMD1-201ENST00000335551 TRMT61AQ96FX7 289 aaKnown RBP5.48□□□□□ -1.53
CSMD1-201ENST00000335551 P2RX4Q99571 388 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 WNT16Q9UBV4 365 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 PLXNB2O15031 1838 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 DOPEY1Q5JWR5 2465 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 A0A096LPE4 126 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 IGKV6-21A0A0C4DH24 114 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 A0A1W2PPZ6 126 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 CKS2P33552 79 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 ID1P41134 155 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 NEUROG1Q92886 237 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 VSIG4Q9Y279 399 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 A0A1B0GWB2 263 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 UBE2L6O14933 153 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 PPICP45877 212 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 LGALS7P47929 136 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 HERPUD1Q15011 391 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 NPEPL1Q8NDH3 523 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 MS4A6EQ96DS6 147 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF414Q96IQ9 312 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 THADAQ6YHU6 1953 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 MUC4Q99102 2169 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 NPIPB6E9PJ23 425 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 PTGESO14684 152 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 OR4P4Q8NGL7 312 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 RBM38Q9H0Z9 239 aaKnown RBP5.48□□□□□ -1.53
CSMD1-201ENST00000335551 ZMIZ1Q9ULJ6 1067 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 SPCS1Q9Y6A9 102 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 MTCH2Q9Y6C9 303 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 FAM157BP0CG42 384 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 FCARP24071 287 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 ABHD14BQ96IU4 210 aa5.48□□□□□ -1.53
CSMD1-201ENST00000335551 FMODQ06828 376 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 C10orf128Q5T292 105 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 DEGS2Q6QHC5 323 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 TCF24Q7RTU0 167 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 CLN8Q9UBY8 286 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 ARID2Q68CP9 1835 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 TMEM189-UBE2V1I3L0A0 370 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 SNAI1O95863 264 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-201ENST00000335551 MRPS21P82921 87 aaKnown RBP5.47□□□□□ -1.53
CSMD1-201ENST00000335551 SSMEM1Q8WWF3 244 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 MPDU1O75352 247 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 ABHD3Q8WU67 409 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 BADQ92934 168 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF707Q96C28 371 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-201ENST00000335551 RCC2Q9P258 522 aaKnown RBP5.47□□□□□ -1.53
CSMD1-201ENST00000335551 HYAL1Q12794 435 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 RNPS1Q15287 305 aaKnown RBP5.47□□□□□ -1.53
CSMD1-201ENST00000335551 LYG1Q8N1E2 194 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 IGHV3-9P01782 118 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 ZFAND6Q6FIF0 208 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 C16orf52Q8NHV5 167 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 PTPMT1Q8WUK0 201 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-201ENST00000335551 GSN-AS1Q9NRJ2 163 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 MUC1P15941 1255 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-201ENST00000335551 WDR38Q5JTN6 314 aa5.47□□□□□ -1.53
CSMD1-201ENST00000335551 ZNF296Q8WUU4 475 aaPredicted RBP5.47□□□□□ -1.53
CSMD1-201ENST00000335551 RHNO1Q9BSD3 238 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms