RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 H7BYZ3 331 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 COX5BP10606 129 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 REG1BP48304 166 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 RAB5CP51148 216 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 FAM122BQ7Z309 247 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 CD1AP06126 327 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 HNF1AP20823 631 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 FGF12P61328 243 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 IL13RA2Q14627 380 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 TMEM41BQ5BJD5 291 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 OR2C3Q8N628 320 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 TMEM231Q9H6L2 316 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 SLC2A9Q9NRM0 540 aa13□□□□□ -0.33
C9orf47-201ENST00000334490 NAT2P11245 290 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 VDAC1P21796 283 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 RPL35P42766 123 aaKnown RBP12.99□□□□□ -0.33
C9orf47-201ENST00000334490 ATP5J2P56134 94 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 POLR2GP62487 172 aaKnown RBP eCLIP12.99□□□□□ -0.33
C9orf47-201ENST00000334490 PRR13Q9NZ81 148 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 KCNMB2Q9Y691 235 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 NPIPB13A6NJU9 1138 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 NPIPB4C9JG80 1138 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 SYNGR1O43759 233 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 KLF7O75840 302 aaPredicted RBP12.99□□□□□ -0.33
C9orf47-201ENST00000334490 CLEC18BQ6UXF7 455 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 LIAT1Q6ZQX7 453 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 SPACA3Q8IXA5 215 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 NTNG2Q96CW9 530 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 COA4Q9NYJ1 87 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 IL19Q9UHD0 177 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 FOXD3Q9UJU5 478 aaPredicted RBP12.99□□□□□ -0.33
C9orf47-201ENST00000334490 FSTP19883 344 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 MESP1Q9BRJ9 268 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 MARVELD1Q9BSK0 173 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 MS4A7Q9GZW8 240 aaPredicted RBP12.99□□□□□ -0.33
C9orf47-201ENST00000334490 ZNF552Q9H707 407 aaPredicted RBP12.99□□□□□ -0.33
C9orf47-201ENST00000334490 A1L4Q6 167 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 SOX15O60248 233 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 AKR1C3P42330 323 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 MMDQ15546 238 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 DOLPP1Q86YN1 238 aa12.99□□□□□ -0.33
C9orf47-201ENST00000334490 PATZ1Q9HBE1 687 aaKnown RBP12.99□□□□□ -0.33
C9orf47-201ENST00000334490 ZNF331Q9NQX6 463 aaPredicted RBP12.99□□□□□ -0.33
C9orf47-201ENST00000334490 ZNF629Q9UEG4 869 aaPredicted RBP12.99□□□□□ -0.33
C9orf47-201ENST00000334490 LSM2Q9Y333 95 aaKnown RBP12.99□□□□□ -0.33
C9orf47-201ENST00000334490 SYNGR3O43761 229 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 LMX1BO60663 402 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 TOX4O94842 621 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 SLC6A1P30531 599 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 C10orf128Q5T292 105 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 LINC01590Q5TEZ4 76 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 NSUN5P2Q63ZY6 315 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 SHISA5Q8N114 240 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 OR52L2PQ8NGH6 319 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 ZNF714Q96N38 554 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 NUDT16L1Q9BRJ7 211 aaKnown RBP12.98□□□□□ -0.33
C9orf47-201ENST00000334490 ELOVL5Q9NYP7 299 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 SF3B6Q9Y3B4 125 aaKnown RBP12.98□□□□□ -0.33
C9orf47-201ENST00000334490 ZFHX2Q9C0A1 2572 aaPredicted RBP12.98□□□□□ -0.33
C9orf47-201ENST00000334490 SNRNP200O75643 2136 aaKnown RBP12.98□□□□□ -0.33
C9orf47-201ENST00000334490 ABCA4P78363 2273 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 MPC2O95563 127 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 THY1P04216 161 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 MPV17P39210 176 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 EXOSC2Q13868 293 aaKnown RBP12.98□□□□□ -0.33
C9orf47-201ENST00000334490 CCDC144NLQ6NUI1 221 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 ZNF680Q8NEM1 530 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 PRDM14Q9GZV8 571 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 CACNA1DQ01668 2161 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 DOPEY2Q9Y3R5 2298 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 UMAD1C9J7I0 102 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 NQO2P16083 231 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 ZNF708P17019 499 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 ERVFRD-1P60508 538 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 FNDC7Q5VTL7 733 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 PRR27Q6MZM9 219 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 TCTE3Q8IZS6 198 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 MUC15Q8N387 334 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 FAM57AQ8TBR7 257 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 PTX4Q96A99 478 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 PGLYRP3Q96LB9 341 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 SMIM7Q9BQ49 75 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 LINC00470Q9BZP3 86 aa12.98□□□□□ -0.33
C9orf47-201ENST00000334490 ZNF646O15015 1829 aaPredicted RBP12.98□□□□□ -0.33
C9orf47-201ENST00000334490 TRBV5-5A0A0J9YX44 114 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 FBP1P09467 338 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 TIMM23BQ5SRD1 257 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 C17orf82Q86X59 251 aaPredicted RBP12.97□□□□□ -0.33
C9orf47-201ENST00000334490 AAMDCQ9H7C9 122 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 CHODLQ9H9P2 273 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 V9GYH0 126 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 RALGAPA1Q6GYQ0 2036 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 SYNGR2O43760 224 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 ICMTO60725 284 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 ISG15P05161 165 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 FFAR4Q5NUL3 377 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 SPNS3Q6ZMD2 512 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 ZNF596Q8TC21 504 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 FAM206AQ9NX38 181 aa12.97□□□□□ -0.33
C9orf47-201ENST00000334490 GAB2Q9UQC2 676 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms