RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 DHRSXQ8N5I4 330 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 ZNF485Q8NCK3 441 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 OR10A7Q8NGE5 316 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 OR51A4Q8NGJ6 313 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 OR10AC1Q8NH08 325 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 SMIM19Q96E16 107 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 TMEM68Q96MH6 324 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 VCXQ9H320 206 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 LINC00574Q9H8X3 128 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 ISG20L2Q9H9L3 353 aaKnown RBP5.12□□□□□ -1.59
SMG1-201ENST00000330588 C12orf4Q9NQ89 552 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 PCDHB16Q9NRJ7 776 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 RBFOX1Q9NWB1 397 aaKnown RBP5.12□□□□□ -1.59
SMG1-201ENST00000330588 PAK1IP1Q9NWT1 392 aaPredicted RBP5.12□□□□□ -1.59
SMG1-201ENST00000330588 BABAM2Q9NXR7 383 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 OR6C3Q9NZP0 311 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 SCOCQ9UIL1 159 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 TRGV10A0A0A0MS01 117 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 IGKV1-12A0A0C4DH73 117 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 TRBV5-5A0A0J9YX44 114 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 A6NIN4 97 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 ZNF729A6NN14 1252 aaPredicted RBP5.12□□□□□ -1.59
SMG1-201ENST00000330588 H3BUI4 141 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 ZNF780AO75290 641 aaPredicted RBP5.12□□□□□ -1.59
SMG1-201ENST00000330588 IGKV1D-12P01611 117 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 GLAP06280 429 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 CCL3L1P16619 93 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 CAPGP40121 348 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 NPBWR2P48146 333 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 CEBPDP49716 269 aaPredicted RBP5.12□□□□□ -1.59
SMG1-201ENST00000330588 EDDM3BP56851 147 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 YIF1BQ5BJH7 314 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 DMKNQ6E0U4 476 aaPredicted RBP5.12□□□□□ -1.59
SMG1-201ENST00000330588 Q6P435 159 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 C8orf59Q8N0T1 100 aaPredicted RBP5.12□□□□□ -1.59
SMG1-201ENST00000330588 OR52N4Q8NGI2 321 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 OR13C9Q8NGT0 318 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 ZNF596Q8TC21 504 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 TSEN15Q8WW01 171 aaKnown RBP5.12□□□□□ -1.59
SMG1-201ENST00000330588 MRPS24Q96EL2 167 aaKnown RBP5.12□□□□□ -1.59
SMG1-201ENST00000330588 TMEM80Q96HE8 168 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 SSX3Q99909 188 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 CLEC7AQ9BXN2 247 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 NPFFR1Q9GZQ6 430 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 TMEM133Q9H2Q1 129 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 DCLRE1BQ9H816 532 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 TMEM138Q9NPI0 162 aa5.12□□□□□ -1.59
SMG1-201ENST00000330588 IGHV2-26A0A0B4J1V2 119 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 A0A0G2JK05 382 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 ODAMA1E959 279 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 FAM90A22PA8MWA6 464 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 E9PI62 339 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 H3BUX3 64 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 PFDN1O60925 122 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 LY86O95711 162 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 HCKP08631 526 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 CGB3P0DN86 165 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 CGB7P0DN87 165 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 IGFBP3P17936 291 aaPredicted RBP5.11□□□□□ -1.59
SMG1-201ENST00000330588 GABRR1P24046 479 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 BMI1P35226 326 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 CEACAM3P40198 252 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 RAB14P61106 215 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 PPP3R1P63098 170 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 CD69Q07108 199 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 GPR176Q14439 515 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 ICAM4Q14773 271 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 MPV17LQ2QL34 196 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 TMEM30BQ3MIR4 351 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 ASPHD2Q6ICH7 369 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 PNKDQ8N490 385 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 OR4S1Q8NGB4 309 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 OR4M1Q8NGD0 313 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 OR4C13Q8NGP0 309 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 PIFOQ8TCI5 191 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 RGP1Q92546 391 aaPredicted RBP5.11□□□□□ -1.59
SMG1-201ENST00000330588 TMEM106AQ96A25 262 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 PDCD1LG2Q9BQ51 273 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 MMP27Q9H306 513 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 AMBNQ9NP70 447 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 NUDT15Q9NV35 164 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 FOXJ3Q9UPW0 622 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 TCF19Q9Y242 345 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 FBN3Q75N90 2809 aa5.11□□□□□ -1.59
SMG1-201ENST00000330588 TRBV5-7A0A0A0MS05 114 aa5.1□□□□□ -1.59
SMG1-201ENST00000330588 A6NDX4 124 aa5.1□□□□□ -1.59
SMG1-201ENST00000330588 FAM90A10PA6NDY2 464 aa5.1□□□□□ -1.59
SMG1-201ENST00000330588 FAM90A18PA6NE21 464 aa5.1□□□□□ -1.59
SMG1-201ENST00000330588 FAM90A16PA6NEW6 464 aa5.1□□□□□ -1.59
SMG1-201ENST00000330588 FAM90A20PA6NIJ5 464 aa5.1□□□□□ -1.59
SMG1-201ENST00000330588 FAM90A7PA6NKC0 464 aa5.1□□□□□ -1.59
SMG1-201ENST00000330588 FAM90A12PA8MX19 464 aa5.1□□□□□ -1.59
SMG1-201ENST00000330588 FAM90A5PA8MXJ8 464 aa5.1□□□□□ -1.59
SMG1-201ENST00000330588 FAM90A23PA8MXZ1 464 aa5.1□□□□□ -1.59
SMG1-201ENST00000330588 SLC33A1O00400 549 aaPredicted RBP5.1□□□□□ -1.59
SMG1-201ENST00000330588 GABRPO00591 440 aa5.1□□□□□ -1.59
SMG1-201ENST00000330588 IGLV1-47P01700 117 aa5.1□□□□□ -1.59
SMG1-201ENST00000330588 SLPIP03973 132 aa5.1□□□□□ -1.59
SMG1-201ENST00000330588 ARG1P05089 322 aa5.1□□□□□ -1.59
SMG1-201ENST00000330588 FAM90A15PP0C7V4 464 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms