RNA–Protein interactions for RNA: ENST00000330494.11

CHD3-201, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CHD3, Length 7,328 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-201ENST00000330494 NGFRP08138 427 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 PSG4Q00888 419 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 PJVKQ0ZLH3 352 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 RNASEKQ6P5S7 137 aaKnown RBP8.88□□□□□ -0.99
CHD3-201ENST00000330494 OR2D3Q8NGH3 330 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 SSMEM1Q8WWF3 244 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 RBM14Q96PK6 669 aaKnown RBP8.88□□□□□ -0.99
CHD3-201ENST00000330494 THADAQ6YHU6 1953 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 A0A1W2PQM1 296 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 CHST1O43916 411 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 PGA3P0DJD8 388 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 ZNF250P15622 560 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 KCNJ3P48549 501 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 CLEC18BQ6UXF7 455 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 TMEM91Q6ZNR0 172 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 OR2C3Q8N628 320 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 GMPPAQ96IJ6 420 aaPredicted RBP8.88□□□□□ -0.99
CHD3-201ENST00000330494 RNF7Q9UBF6 113 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 ZNF737O75373 536 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 TCTEX1D1Q8N7M0 179 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 RBM38Q9H0Z9 239 aaKnown RBP8.88□□□□□ -0.99
CHD3-201ENST00000330494 SEBOXQ9HB31 216 aaPredicted RBP8.88□□□□□ -0.99
CHD3-201ENST00000330494 FOXJ2Q9P0K8 574 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 SLC23A3Q6PIS1 610 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 SLC7A10Q9NS82 523 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 RALYQ9UKM9 306 aaKnown RBP8.88□□□□□ -0.99
CHD3-201ENST00000330494 SCN8AQ9UQD0 1980 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 ZNF98A6NK75 572 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 GDF9O60383 454 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 MYPOPQ86VE0 399 aaPredicted RBP8.88□□□□□ -0.99
CHD3-201ENST00000330494 BCL2L2Q92843 193 aaPredicted RBP8.88□□□□□ -0.99
CHD3-201ENST00000330494 ISOC2Q96AB3 205 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 SMIM12Q96EX1 92 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 AMELYQ99218 206 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 A0A1W2PP11 408 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 CDRT15L2A8MXV6 281 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 F2RL2O00254 374 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 ARG1P05089 322 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 KIR3DL2P43630 455 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 ZNF826PQ6ZT77 177 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 WFDC3Q8IUB2 231 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 PACRGQ96M98 296 aaPredicted RBP8.88□□□□□ -0.99
CHD3-201ENST00000330494 ST6GALNAC2Q9UJ37 374 aa8.88□□□□□ -0.99
CHD3-201ENST00000330494 IGHV3-72A0A0B4J1Y9 119 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 ZNF788Q6ZQV5 615 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 INSIG2Q9Y5U4 225 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 LOC285556D6RIA3 1793 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 GATCO43716 136 aaKnown RBP8.87□□□□□ -0.99
CHD3-201ENST00000330494 OR4A8P0C604 315 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 CHRNA7P36544 502 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 PPP1CCP36873 323 aaKnown RBP8.87□□□□□ -0.99
CHD3-201ENST00000330494 SNAI3Q3KNW1 292 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 LYZL2Q7Z4W2 148 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 OR4F17Q8NGA8 305 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 PSG2P11465 335 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 ZFP36L2P47974 494 aaKnown RBP8.87□□□□□ -0.99
CHD3-201ENST00000330494 LBHQ53QV2 105 aaPredicted RBP8.87□□□□□ -0.99
CHD3-201ENST00000330494 LIAT1Q6ZQX7 453 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 DUSP18Q8NEJ0 188 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 ZNF764Q96H86 408 aaPredicted RBP8.87□□□□□ -0.99
CHD3-201ENST00000330494 GPHA2Q96T91 129 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 ZNF665Q9H7R5 613 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 TMEM33P57088 247 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 ABLIM2Q6H8Q1 611 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 OR10A7Q8NGE5 316 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 OR10G4Q8NGN3 311 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 OR10G9Q8NGN4 311 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 OR10G7Q8NGN6 311 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 MRPL24Q96A35 216 aaKnown RBP8.87□□□□□ -0.99
CHD3-201ENST00000330494 RAB40CQ96S21 281 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 CCL13Q99616 98 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 HILPDAQ9Y5L2 63 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 LIPGQ9Y5X9 500 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 KIAA1324LA8MWY0 1029 aaPredicted RBP8.87□□□□□ -0.99
CHD3-201ENST00000330494 ASAH2BP0C7U1 165 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 VSIG8P0DPA2 414 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 PKIAP61925 76 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 NHLRC2Q8NBF2 726 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 TMUB1Q9BVT8 246 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 HS3ST3B1Q9Y662 390 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 SBF1O95248 1867 aa8.87□□□□□ -0.99
CHD3-201ENST00000330494 RAB29O14966 203 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 PTP4A3O75365 173 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 CST4P01036 141 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 PPYP01298 95 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 RPS4Y2Q8TD47 263 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 FAM210BQ96KR6 192 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 B4E171 279 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 GFRA3O60609 400 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 CD82P27701 267 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 TSPAN7P41732 249 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 PAX5Q02548 391 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 ECSCRQ19T08 205 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 TRAT1Q6PIZ9 186 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 OR4S2Q8NH73 311 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 RNF133Q8WVZ7 376 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 NOL4LQ96MY1 436 aaPredicted RBP8.86□□□□□ -0.99
CHD3-201ENST00000330494 NPAS1Q99742 590 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 GDF15Q99988 308 aa8.86□□□□□ -0.99
CHD3-201ENST00000330494 FKBP11Q9NYL4 201 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms