RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 HSPB1P04792 205 aaKnown RBP6.79□□□□□ -1.32
VMA21-201ENST00000330374 MAS1LP35410 378 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 LBX1P52954 281 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 RTP5Q14D33 572 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 P2RY6Q15077 328 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 ZNF506Q5JVG8 444 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 Q6ZPA2 131 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 ZNF818PQ6ZRF7 136 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 SLC25A26Q70HW3 274 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 SPTSSAQ969W0 71 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 MOB3AQ96BX8 217 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 PLK3Q9H4B4 646 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 CCL28Q9NRJ3 127 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 LILRA5A6NI73 299 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 NRASP01111 189 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 IFNA5P01569 189 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 IGHV3-9P01782 118 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 SCTP09683 121 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 BMP5P22003 454 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 LMO1P25800 156 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 MRPS21P82921 87 aaKnown RBP6.79□□□□□ -1.32
VMA21-201ENST00000330374 SHBQ15464 509 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 CXorf67Q86X51 503 aaPredicted RBP6.79□□□□□ -1.32
VMA21-201ENST00000330374 ZNF664Q8N3J9 261 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 PRR18Q8N4B5 295 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 RPRMQ9NS64 109 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 LYRM2Q9NU23 88 aaPredicted RBP6.79□□□□□ -1.32
VMA21-201ENST00000330374 MMP17Q9ULZ9 603 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 V9GYS6 101 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 A0A1W2PPQ1 181 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 XKRY2A2RUG3 117 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 METTL15P1P0C7V9 234 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 B4GALT1P15291 398 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 MLF1P58340 268 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 COL10A1Q03692 680 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 ZNF468Q5VIY5 522 aaPredicted RBP6.79□□□□□ -1.32
VMA21-201ENST00000330374 ZNF66Q6ZN08 573 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 ANKRD37Q7Z713 158 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 SELENOHQ8IZQ5 122 aaKnown RBP6.79□□□□□ -1.32
VMA21-201ENST00000330374 OR1K1Q8NGR3 316 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 OR4X1Q8NH49 305 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 M1APQ8TC57 530 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 FANCD2OSQ96PS1 177 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 ALKBH3Q96Q83 286 aaPredicted RBP6.79□□□□□ -1.32
VMA21-201ENST00000330374 TMEM222Q9H0R3 208 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 AURKAIP1Q9NWT8 199 aaPredicted RBP6.79□□□□□ -1.32
VMA21-201ENST00000330374 MYOTQ9UBF9 498 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 COL4A2P08572 1712 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 A0A087WWC5 75 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 IGKV1D-13A0A0B4J2D9 117 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 ARGFXA6NJG6 315 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 NPIPB13A6NJU9 1138 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 NPIPB4C9JG80 1138 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 DHHO43323 396 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 TIAF1O95411 115 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 CELA2AP08217 269 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 IGKV1-13P0DP09 117 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 CD38P28907 300 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 PRSS8Q16651 343 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 SCGB1C1Q8TD33 95 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 GNPNAT1Q96EK6 184 aaPredicted RBP6.79□□□□□ -1.32
VMA21-201ENST00000330374 C8orf33Q9H7E9 229 aaPredicted RBP6.79□□□□□ -1.32
VMA21-201ENST00000330374 SIRT7Q9NRC8 400 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 OR14J1Q9UGF5 321 aa6.79□□□□□ -1.32
VMA21-201ENST00000330374 C9J4A7 227 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 AMBPP02760 352 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 GZMBP10144 247 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 NR2C1P13056 603 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 TCN2P20062 427 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 HYAL1Q12794 435 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 SLC35E3Q7Z769 313 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 PHOSPHO2Q8TCD6 241 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 IL36RNQ9UBH0 155 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 TRAV39A0A0B4J263 110 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 LOC102723971A0A1B0GUV8 181 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 MEOX1P50221 254 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 TRIM61Q5EBN2 209 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 C9orf135Q5VTT2 229 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 FAM90A2PQ658T7 463 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 SSX7Q7RTT5 188 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 CALHM1Q8IU99 346 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 MRPL41Q8IXM3 137 aaKnown RBP6.78□□□□□ -1.32
VMA21-201ENST00000330374 ODF3L1Q8IXM7 274 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 IL1F10Q8WWZ1 152 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 SPIN2AQ99865 258 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 SPIN2BQ9BPZ2 258 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 SMIM7Q9BQ49 75 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 ELOVL1Q9BW60 279 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 PTRH2Q9Y3E5 179 aaKnown RBP6.78□□□□□ -1.32
VMA21-201ENST00000330374 NBEAQ8NFP9 2946 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 IGHV1OR21-1A0A087WYE8 117 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 A0A0U1RQV5 110 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 TK1P04183 234 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 DTYMKP23919 212 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 LRTM2Q8N967 370 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 HIST1H2AAQ96QV6 131 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 DEFB126Q9BYW3 111 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 MTIF3Q9H2K0 278 aaKnown RBP6.78□□□□□ -1.32
VMA21-201ENST00000330374 DECR2Q9NUI1 292 aa6.78□□□□□ -1.32
VMA21-201ENST00000330374 A0A0G2JRQ6 117 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms