RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 PRR19A6NJB7 356 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 CEBPZOSA8MTT3 80 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 F2Z2F3 143 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 TNFRSF10CO14798 259 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 LINC01565O15544 149 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 AZU1P20160 251 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 ZNF266Q14584 549 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 FAM71F2Q6NXP2 309 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 KLHL24Q6TFL4 600 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 ZNF440Q8IYI8 595 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 TMEM217Q8N7C4 229 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 WDYHV1Q96HA8 205 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 SRA1Q9HD15 236 aaKnown RBP10.25□□□□□ -0.77
SHMT2-201ENST00000328923 THAP10Q9P2Z0 257 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-201ENST00000328923 GPR75O95800 540 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 P2RY2P41231 377 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 ZNF83P51522 516 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 ARG2P78540 354 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 MFGE8Q08431 387 aaPredicted RBP10.25□□□□□ -0.77
SHMT2-201ENST00000328923 SMAGPQ0VAQ4 97 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 ALG10Q5BKT4 473 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 FAM78BQ5VT40 261 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 CYP2G1PQ6ZSU1 146 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 OR4F17Q8NGA8 305 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 OR4F4Q96R69 305 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 CCDC3Q9BQI4 270 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 HDAC8Q9BY41 377 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 CHODLQ9H9P2 273 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 CDC42EP3Q9UKI2 254 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 SELENOKQ9Y6D0 94 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 SPACA6W5XKT8 324 aa10.25□□□□□ -0.77
SHMT2-201ENST00000328923 SCN3AQ9NY46 2000 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 KIF26BQ2KJY2 2108 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 BRWD1Q9NSI6 2320 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 IGKV1D-42A0A075B6H8 117 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 RENP00797 406 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 ZNF16P17020 682 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-201ENST00000328923 CTXN1P60606 82 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 ROM1Q03395 351 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 ZNF74Q16587 644 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 SP6Q3SY56 376 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 KIAA0895LQ68EN5 471 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 LCN15Q6UWW0 184 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 ATG4DQ86TL0 474 aaPredicted RBP10.24□□□□□ -0.77
SHMT2-201ENST00000328923 OR1B1Q8NGR6 318 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 EMG1Q92979 244 aaKnown RBP10.24□□□□□ -0.77
SHMT2-201ENST00000328923 SFRP2Q96HF1 295 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 ZNF479Q96JC4 524 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 RSG1Q9BU20 258 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 GTSF1LQ9H1H1 148 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 MMP17Q9ULZ9 603 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 GTF3C1Q12789 2109 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 IGSF23A1L1A6 192 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 FAM166BA8MTA8 275 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 H7C1C5 153 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 LMX1BO60663 402 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 ESDP10768 282 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 PNMTP11086 282 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 CD99P14209 185 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 AMY2BP19961 511 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 AADACP22760 399 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 SFTPDP35247 375 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 MTCP1P56278 107 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 LCN6P62502 163 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 PSG9Q00887 426 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 DEFB134Q4QY38 66 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 RAET1LQ5VY80 246 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 LYPD6Q86Y78 171 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 YAF2Q8IY57 180 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 C5orf17Q8NAS9 161 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 ELOVL3Q9HB03 270 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 TP73-AS1Q9UF72 201 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 RHBDD3Q9Y3P4 386 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 OR1A2Q9Y585 309 aa10.24□□□□□ -0.77
SHMT2-201ENST00000328923 LAMA1P25391 3075 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 OR6C6A6NF89 314 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 RAD51DO75771 328 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 TNFSF15O95150 251 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 ADH1BP00325 375 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 ASAH2BP0C7U1 165 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 SRP14P37108 136 aaKnown RBP10.23□□□□□ -0.77
SHMT2-201ENST00000328923 ZNF787Q6DD87 383 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 CPEB2Q7Z5Q1 589 aaKnown RBP10.23□□□□□ -0.77
SHMT2-201ENST00000328923 MUC15Q8N387 334 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 KLHDC1Q8N7A1 406 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 ZIC4Q8N9L1 334 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 SLC38A9Q8NBW4 561 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 HEBP2Q9Y5Z4 205 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 RAMP3O60896 148 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 MT-CO2P00403 227 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 CT62P0C5K7 136 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 VSIG8P0DPA2 414 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 FOXL2P58012 376 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 FAM53BQ14153 422 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 IL13RA2Q14627 380 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 HLA-BQ31612 363 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 KIAA1644Q3SXP7 199 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 DNM1P34Q6PK57 102 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 PARM1Q6UWI2 310 aa10.23□□□□□ -0.77
SHMT2-201ENST00000328923 LYZL2Q7Z4W2 148 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms