RNA–Protein interactions for RNA: ENST00000325307.11

HMGB3-201, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 3,560 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-201ENST00000325307 ZNF251Q9BRH9 671 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 MED28Q9H204 178 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 SPACA1Q9HBV2 294 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 CHMP1AQ9HD42 196 aaPredicted RBP8.43□□□□□ -1.06
HMGB3-201ENST00000325307 ZNF701Q9NV72 531 aaPredicted RBP8.43□□□□□ -1.06
HMGB3-201ENST00000325307 ARFGEF3Q5TH69 2177 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 AKAP6Q13023 2319 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 RFPL4AA6NLU0 287 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 SRRM5B3KS81 715 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 RFPL4AL1F8VTS6 287 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 WRBO00258 174 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 HAND1O96004 215 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 ANXA3P12429 323 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 ANXA7P20073 488 aaKnown RBP8.43□□□□□ -1.06
HMGB3-201ENST00000325307 GABRA2P47869 451 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 PPOXP50336 477 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 AP3S2P59780 193 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 PAN3Q58A45 887 aaKnown RBP8.43□□□□□ -1.06
HMGB3-201ENST00000325307 CMSS1Q9BQ75 279 aaKnown RBP8.43□□□□□ -1.06
HMGB3-201ENST00000325307 IGHV1-69-2A0A0G2JMI3 117 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 FOXI3A8MTJ6 420 aaPredicted RBP8.43□□□□□ -1.06
HMGB3-201ENST00000325307 OR2H2O95918 312 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 CD8AP01732 235 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 TFF1P04155 84 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 CD3DP04234 171 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 VSIG10L2P0DP72 767 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 NUP62P37198 522 aaPredicted RBP8.43□□□□□ -1.06
HMGB3-201ENST00000325307 ACTBP60709 375 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 ACTG1P63261 375 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 PNLIPRP3Q17RR3 467 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 C1orf87Q8N0U7 546 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 CLRN3Q8NCR9 226 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 ST6GALNAC5Q9BVH7 336 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 HES4Q9HCC6 221 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 RASL12Q9NYN1 266 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 AK3Q9UIJ7 227 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 HSF4Q9ULV5 492 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 MAB21L2Q9Y586 359 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 LRBAP50851 2863 aa8.43□□□□□ -1.06
HMGB3-201ENST00000325307 TRBV23-1A0A0A0MS06 115 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 SULT1C2O00338 296 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 GPR37O15354 613 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 DANCRP0C864 163 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 CFHR2P36980 270 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 MICBQ29980 383 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 GLDNQ6ZMI3 551 aaPredicted RBP8.42□□□□□ -1.06
HMGB3-201ENST00000325307 HSD17B13Q7Z5P4 300 aaPredicted RBP8.42□□□□□ -1.06
HMGB3-201ENST00000325307 GVQW1Q8N7I0 195 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 SUMF2Q8NBJ7 301 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 WDR89Q96FK6 387 aaPredicted RBP8.42□□□□□ -1.06
HMGB3-201ENST00000325307 HDHD3Q9BSH5 251 aaPredicted RBP8.42□□□□□ -1.06
HMGB3-201ENST00000325307 WIPI2Q9Y4P8 454 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 SNAPC5O75971 98 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 GOSR1O95249 250 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 KNG1P01042 644 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 MELTFP08582 738 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 CDKN1AP38936 164 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 ZNF146Q15072 292 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 HFEQ30201 348 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 SLC36A1Q7Z2H8 476 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 Q8TCH9 128 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 MAFIPQ8WZ33 124 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 DPCDQ9BVM2 203 aaPredicted RBP8.42□□□□□ -1.06
HMGB3-201ENST00000325307 DLL4Q9NR61 685 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 TMEM106BQ9NUM4 274 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 SESN1Q9Y6P5 492 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 A0A1B0GV90 55 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 OR2AT4A6NND4 320 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 CSF1P09603 554 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 SAPCD1Q5SSQ6 148 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 DTX2Q86UW9 622 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 OR52B4Q8NGK2 314 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 CHST6Q9GZX3 395 aa8.42□□□□□ -1.06
HMGB3-201ENST00000325307 ZNF230Q9UIE0 474 aaPredicted RBP8.42□□□□□ -1.06
HMGB3-201ENST00000325307 TRAV24A0A0B4J272 114 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 LYNX1G3V0Z9 82 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 ZNF735P0CB33 412 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 LYNX1P0DP58 116 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 COL8A1P27658 744 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 RBM39Q14498 530 aaKnown RBP8.41□□□□□ -1.06
HMGB3-201ENST00000325307 Q6P435 159 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 OR51S1Q8NGJ8 323 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 MRGPRFQ96AM1 343 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 OR51M1Q9H341 326 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 TAS2R8Q9NYW2 309 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 USF3Q68DE3 2245 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.41□□□□□ -1.06
HMGB3-201ENST00000325307 LHBP01229 141 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 PSG2P11465 335 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 PRDX2P32119 198 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 TAS2R60P59551 318 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 ZNF626Q68DY1 528 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 C11orf71Q6IPW1 123 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 OR4S1Q8NGB4 309 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.41□□□□□ -1.06
HMGB3-201ENST00000325307 SCP2D1Q9UJQ7 156 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 ZNF222Q9UK12 451 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 HRNRQ86YZ3 2850 aaPredicted RBP8.41□□□□□ -1.06
HMGB3-201ENST00000325307 DYSFO75923 2080 aa8.41□□□□□ -1.06
HMGB3-201ENST00000325307 LY6HO94772 140 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms