RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 SELEP16581 610 aa18.17■□□□□ 0.5
LIMS2-201ENST00000324938 VDAC1P21796 283 aa18.17■□□□□ 0.5
LIMS2-201ENST00000324938 ZNF154Q13106 437 aa18.17■□□□□ 0.5
LIMS2-201ENST00000324938 ALKBH6Q3KRA9 238 aa18.17■□□□□ 0.5
LIMS2-201ENST00000324938 PUSL1Q8N0Z8 303 aaKnown RBP18.17■□□□□ 0.5
LIMS2-201ENST00000324938 CNEP1R1Q8N9A8 125 aa18.17■□□□□ 0.5
LIMS2-201ENST00000324938 LYPD6BQ8NI32 183 aa18.17■□□□□ 0.5
LIMS2-201ENST00000324938 FAM74A7A6NL05 159 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 SLC33A1O00400 549 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-201ENST00000324938 ADAM20O43506 726 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 OR2H2O95918 312 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 MUC1P15941 1255 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-201ENST00000324938 CBR1P16152 277 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 S100GP29377 79 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 KIR2DL2P43627 348 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-201ENST00000324938 EWSR1Q01844 656 aaKnown RBP eCLIP18.16■□□□□ 0.5
LIMS2-201ENST00000324938 NHLH2Q02577 135 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 PSG7Q13046 419 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 GUCA2BQ16661 112 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 FAM74A3Q4VXF1 159 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 OR2C3Q8N628 320 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 C1orf162Q8NEQ5 155 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-201ENST00000324938 SARAFQ96BY9 339 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 SEC11CQ9BY50 192 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 SPP1P10451 314 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 PVALBP20472 110 aaPredicted RBP18.16■□□□□ 0.5
LIMS2-201ENST00000324938 SWI5Q1ZZU3 235 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 ZNF497Q6ZNH5 498 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 C9orf106Q8NAJ2 232 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 PLPPR1Q8TBJ4 325 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 WNT2BQ93097 391 aa18.16■□□□□ 0.5
LIMS2-201ENST00000324938 TMEM210A6NLX4 147 aa18.15■□□□□ 0.5
LIMS2-201ENST00000324938 SIRPB1O00241 398 aa18.15■□□□□ 0.5
LIMS2-201ENST00000324938 IGKV3-15P01624 115 aa18.15■□□□□ 0.5
LIMS2-201ENST00000324938 WNT2P09544 360 aa18.15■□□□□ 0.5
LIMS2-201ENST00000324938 F2RP25116 425 aa18.15■□□□□ 0.5
LIMS2-201ENST00000324938 ZNF146Q15072 292 aa18.15■□□□□ 0.5
LIMS2-201ENST00000324938 VWA1Q6PCB0 445 aa18.15■□□□□ 0.5
LIMS2-201ENST00000324938 FAM96BQ9Y3D0 163 aa18.15■□□□□ 0.5
LIMS2-201ENST00000324938 CDIPTO14735 213 aa18.14■□□□□ 0.5
LIMS2-201ENST00000324938 TNFSF12O43508 249 aa18.14■□□□□ 0.5
LIMS2-201ENST00000324938 POLR2GP62487 172 aaKnown RBP eCLIP18.14■□□□□ 0.5
LIMS2-201ENST00000324938 ZNF169Q14929 603 aaPredicted RBP18.14■□□□□ 0.5
LIMS2-201ENST00000324938 TLNRD1Q9H1K6 362 aa18.14■□□□□ 0.5
LIMS2-201ENST00000324938 PRR33A8MZF0 331 aa18.14■□□□□ 0.49
LIMS2-201ENST00000324938 TRIM77I1YAP6 450 aa18.14■□□□□ 0.49
LIMS2-201ENST00000324938 NXPH2O95156 264 aa18.14■□□□□ 0.49
LIMS2-201ENST00000324938 DANCRP0C864 163 aa18.14■□□□□ 0.49
LIMS2-201ENST00000324938 HOXC12P31275 282 aa18.14■□□□□ 0.49
LIMS2-201ENST00000324938 OR8G1Q15617 311 aa18.14■□□□□ 0.49
LIMS2-201ENST00000324938 WDR31Q8NA23 367 aa18.14■□□□□ 0.49
LIMS2-201ENST00000324938 KLF14Q8TD94 323 aaPredicted RBP18.14■□□□□ 0.49
LIMS2-201ENST00000324938 OR1A1Q9P1Q5 309 aa18.14■□□□□ 0.49
LIMS2-201ENST00000324938 ERRFI1Q9UJM3 462 aaPredicted RBP18.14■□□□□ 0.49
LIMS2-201ENST00000324938 CD5P06127 495 aa18.13■□□□□ 0.49
LIMS2-201ENST00000324938 ACAA1P09110 424 aaPredicted RBP18.13■□□□□ 0.49
LIMS2-201ENST00000324938 MPV17P39210 176 aa18.13■□□□□ 0.49
LIMS2-201ENST00000324938 OR10V1Q8NGI7 309 aa18.13■□□□□ 0.49
LIMS2-201ENST00000324938 IL1F10Q8WWZ1 152 aa18.13■□□□□ 0.49
LIMS2-201ENST00000324938 LYRM2Q9NU23 88 aaPredicted RBP18.13■□□□□ 0.49
LIMS2-201ENST00000324938 PIGBOS1A0A0B4J2F0 54 aa18.13■□□□□ 0.49
LIMS2-201ENST00000324938 FAM24AA6NFZ4 105 aa18.13■□□□□ 0.49
LIMS2-201ENST00000324938 RNASEK-C17orf49H0YIS7 233 aa18.13■□□□□ 0.49
LIMS2-201ENST00000324938 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.13■□□□□ 0.49
LIMS2-201ENST00000324938 SSSCA1O60232 199 aa18.13■□□□□ 0.49
LIMS2-201ENST00000324938 MMP9P14780 707 aa18.13■□□□□ 0.49
LIMS2-201ENST00000324938 ID4P47928 161 aa18.13■□□□□ 0.49
LIMS2-201ENST00000324938 ID3Q02535 119 aa18.13■□□□□ 0.49
LIMS2-201ENST00000324938 CXorf66Q5JRM2 361 aaPredicted RBP18.13■□□□□ 0.49
LIMS2-201ENST00000324938 IGSF23A1L1A6 192 aa18.12■□□□□ 0.49
LIMS2-201ENST00000324938 H0YL77 283 aa18.12■□□□□ 0.49
LIMS2-201ENST00000324938 SH2D1BO14796 132 aa18.12■□□□□ 0.49
LIMS2-201ENST00000324938 ACSF3Q4G176 576 aaPredicted RBP18.12■□□□□ 0.49
LIMS2-201ENST00000324938 PLEKHF2Q9H8W4 249 aa18.12■□□□□ 0.49
LIMS2-201ENST00000324938 HES4Q9HCC6 221 aa18.12■□□□□ 0.49
LIMS2-201ENST00000324938 MBNL3Q9NUK0 354 aaKnown RBP18.12■□□□□ 0.49
LIMS2-201ENST00000324938 LUZP4Q9P127 313 aa18.12■□□□□ 0.49
LIMS2-201ENST00000324938 PITX3O75364 302 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 OR8U9P0C7N5 309 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 DEFB109BQ30KR1 87 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 SMUG1Q53HV7 270 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 OR8U1Q8NH10 309 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 SLC25A31Q9H0C2 315 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 TRAPPC2LQ9UL33 140 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 WIPI2Q9Y4P8 454 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 EP300Q09472 2414 aaPredicted RBP18.11■□□□□ 0.49
LIMS2-201ENST00000324938 INTS1Q8N201 2190 aaKnown RBP18.11■□□□□ 0.49
LIMS2-201ENST00000324938 TRAV39A0A0B4J263 110 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 CEACAM4O75871 244 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 AGFG2O95081 481 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 GRPP07492 148 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 RAB5CP51148 216 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 TESK1Q15569 626 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 CLRN3Q8NCR9 226 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 MAGT1Q9H0U3 335 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 SH3BGRL3Q9H299 93 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 TAAR3PQ9P1P4 343 aa18.11■□□□□ 0.49
LIMS2-201ENST00000324938 PURGQ9UJV8 347 aaKnown RBP18.11■□□□□ 0.49
LIMS2-201ENST00000324938 MLNRO43193 412 aa18.1■□□□□ 0.49
LIMS2-201ENST00000324938 SNAPINO95295 136 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms