RNA–Protein interactions for RNA: ENST00000324554.9

USHBP1-202, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 2,402 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-202ENST00000324554 RAB1AP62820 205 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 SRPXP78539 464 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 CXorf66Q5JRM2 361 aaPredicted RBP13.73□□□□□ -0.21
USHBP1-202ENST00000324554 ZNF818PQ6ZRF7 136 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 TMPRSS7Q7RTY8 843 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 ASCL3Q9NQ33 180 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 FAM186AA6NE01 2351 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 A0A1W2PPE2 198 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 ZNF724A8MTY0 619 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 ATP6V0CP27449 155 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 NKX2-1P43699 371 aaPredicted RBP13.73□□□□□ -0.21
USHBP1-202ENST00000324554 SULT1A1P50225 295 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 TSC22D1Q15714 1073 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 MPV17LQ2QL34 196 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 SPIN3Q5JUX0 258 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 FAM24BQ8N5W8 94 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 POM121L2Q96KW2 1035 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 TMEM56Q96MV1 263 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 KCNJ16Q9NPI9 418 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 ABI3Q9P2A4 366 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 UBE2J1Q9Y385 318 aaPredicted RBP13.73□□□□□ -0.21
USHBP1-202ENST00000324554 TMEM56-RWDD3S4R434 201 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 DNAJC13O75165 2243 aa13.73□□□□□ -0.21
USHBP1-202ENST00000324554 IGKV1D-13A0A0B4J2D9 117 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 PRSS44E7EML9 344 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 UBE2CO00762 179 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 SSSCA1O60232 199 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 IGKV1-13P0DP09 117 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 ZNF695Q8IW36 515 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 ODF3L1Q8IXM7 274 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 SELENOHQ8IZQ5 122 aaKnown RBP13.72□□□□□ -0.21
USHBP1-202ENST00000324554 GAPTQ8N292 157 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 ZNF561Q8N587 486 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 LILRB1Q8NHL6 650 aaPredicted RBP13.72□□□□□ -0.21
USHBP1-202ENST00000324554 PBDC1Q9BVG4 233 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 MGAQ8IWI9 3026 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 PROB1E7EW31 1015 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 TRAPPC2LH3BP13 241 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 ADAM20O43506 726 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 SYNGR1O43759 233 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 RAB5AP20339 215 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 ARR3P36575 388 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 RND3P61587 244 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 C3AR1Q16581 482 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 MKXQ8IYA7 352 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 ZFP62Q8NB50 900 aaPredicted RBP13.72□□□□□ -0.21
USHBP1-202ENST00000324554 OR2G3Q8NGZ4 309 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 GLRX2Q9NS18 164 aa13.72□□□□□ -0.21
USHBP1-202ENST00000324554 SLC22A20A6NK97 555 aa13.71□□□□□ -0.21
USHBP1-202ENST00000324554 SLC33A1O00400 549 aaPredicted RBP13.71□□□□□ -0.21
USHBP1-202ENST00000324554 TMEM50AO95807 157 aa13.71□□□□□ -0.21
USHBP1-202ENST00000324554 S100A6P06703 90 aa13.71□□□□□ -0.21
USHBP1-202ENST00000324554 PLGLB1Q02325 96 aa13.71□□□□□ -0.21
USHBP1-202ENST00000324554 SLC16A13Q7RTY0 426 aa13.71□□□□□ -0.21
USHBP1-202ENST00000324554 NUFIP2Q7Z417 695 aaKnown RBP13.71□□□□□ -0.21
USHBP1-202ENST00000324554 TMEM252Q8N6L7 170 aa13.71□□□□□ -0.21
USHBP1-202ENST00000324554 ZNF565Q8N9K5 539 aa13.71□□□□□ -0.21
USHBP1-202ENST00000324554 OR5A2Q8NGI9 324 aa13.71□□□□□ -0.21
USHBP1-202ENST00000324554 NEK7Q8TDX7 302 aa13.71□□□□□ -0.21
USHBP1-202ENST00000324554 FER1L6-AS2Q96M78 137 aa13.71□□□□□ -0.21
USHBP1-202ENST00000324554 PTPRBP23467 1997 aa13.71□□□□□ -0.21
USHBP1-202ENST00000324554 IGKV1-6A0A0C4DH72 117 aa13.71□□□□□ -0.22
USHBP1-202ENST00000324554 CD300LBA8K4G0 201 aa13.71□□□□□ -0.22
USHBP1-202ENST00000324554 PITX3O75364 302 aa13.71□□□□□ -0.22
USHBP1-202ENST00000324554 TUSC2O75896 110 aa13.71□□□□□ -0.22
USHBP1-202ENST00000324554 NXPH3O95157 252 aa13.71□□□□□ -0.22
USHBP1-202ENST00000324554 NBL1P41271 181 aa13.71□□□□□ -0.22
USHBP1-202ENST00000324554 CCL11P51671 97 aa13.71□□□□□ -0.22
USHBP1-202ENST00000324554 RHEBQ15382 184 aa13.71□□□□□ -0.22
USHBP1-202ENST00000324554 SPSB3Q6PJ21 355 aa13.71□□□□□ -0.22
USHBP1-202ENST00000324554 OR1J1Q8NGS3 322 aa13.71□□□□□ -0.22
USHBP1-202ENST00000324554 NANPQ8TBE9 248 aa13.71□□□□□ -0.22
USHBP1-202ENST00000324554 LYRM2Q9NU23 88 aaPredicted RBP13.71□□□□□ -0.22
USHBP1-202ENST00000324554 ATP23Q9Y6H3 246 aa13.71□□□□□ -0.22
USHBP1-202ENST00000324554 KIR2DS1A0A191URI9 304 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 LILRA1O75019 489 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 CST7O76096 145 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 ZNF14P17017 642 aaPredicted RBP13.7□□□□□ -0.22
USHBP1-202ENST00000324554 EPHA1P21709 976 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 KIR2DS4P43632 304 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 ZNF266Q14584 549 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 KIR2DS1Q14954 304 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 ASCL5Q7RTU5 278 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 OR5C1Q8NGR4 320 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 OR5P3Q8WZ94 311 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 HIST1H2AAQ96QV6 131 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 A0A1B0GW64 132 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 SPINK2P20155 84 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 FABP9Q0Z7S8 132 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 RNPS1Q15287 305 aaKnown RBP13.7□□□□□ -0.22
USHBP1-202ENST00000324554 NMSQ5H8A3 153 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 ADAM5Q6NVV9 412 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 LFNGQ8NES3 379 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 ZNF488Q96MN9 340 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 OPA3Q9H6K4 179 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 PLEKHF2Q9H8W4 249 aa13.7□□□□□ -0.22
USHBP1-202ENST00000324554 PUS1Q9Y606 427 aaKnown RBP eCLIP13.7□□□□□ -0.22
USHBP1-202ENST00000324554 HSD17B6O14756 317 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 WNT5AP41221 380 aa13.69□□□□□ -0.22
USHBP1-202ENST00000324554 OR2B8PP59922 312 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms