RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 SLC2A9Q9NRM0 540 aa13.27□□□□□ -0.28
VARS2-201ENST00000321897 RFPL3SP0C7P2 107 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 PMCHP20382 165 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 FUT3P21217 361 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 RND3P61587 244 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 HIST1H3AP68431 136 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 VAMP3Q15836 100 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 HIKESHIQ53FT3 197 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 FAM78BQ5VT40 261 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 ZDHHC23Q8IYP9 409 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 OR10A7Q8NGE5 316 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 OR10V1Q8NGI7 309 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 AQP10Q96PS8 301 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 ANXA10Q9UJ72 324 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 C5orf63A6NC05 138 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 MAP1LC3B2A6NCE7 125 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 KLRC4-KLRK1H3BQV0 150 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 SLC31A2O15432 143 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 OR8U8P0C7N1 319 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 PYY3Q5JQD4 70 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 OR10AD1Q8NGE0 317 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 MAP1LC3BQ9GZQ8 125 aa13.27□□□□□ -0.29
VARS2-201ENST00000321897 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.26□□□□□ -0.29
VARS2-201ENST00000321897 CHST1O43916 411 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 SEC11BP0C7V7 166 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 PGA3P0DJD8 388 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 KITLGP21583 273 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 SPEM2Q0P670 501 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 PRDX4Q13162 271 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 IL11RAQ14626 422 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 PSENENQ9NZ42 101 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 TRAPPC1Q9Y5R8 145 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 ST8SIA5O15466 376 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 SNRPCP09234 159 aaKnown RBP13.26□□□□□ -0.29
VARS2-201ENST00000321897 P2RY1P47900 373 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 ENDOGQ14249 297 aaKnown RBP13.26□□□□□ -0.29
VARS2-201ENST00000321897 IGFBP7Q16270 282 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 REC114Q7Z4M0 266 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 FAM206AQ9NX38 181 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 A8MXE2 369 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 RPS23P62266 143 aaKnown RBP13.26□□□□□ -0.29
VARS2-201ENST00000321897 TPRX1Q8N7U7 411 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 RSG1Q9BU20 258 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 ABHD14AQ9BUJ0 271 aa13.26□□□□□ -0.29
VARS2-201ENST00000321897 DHRS7CA6NNS2 312 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 C9JQL5 133 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 LIFP15018 202 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 SELEP16581 610 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 GPX4P36969 197 aaPredicted RBP13.25□□□□□ -0.29
VARS2-201ENST00000321897 RAC3P60763 192 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 LHFPL2Q6ZUX7 228 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 VAMP8Q9BV40 100 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 GBF1Q92538 1859 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 ELOA3CA0A087WX78 387 aaPredicted RBP13.25□□□□□ -0.29
VARS2-201ENST00000321897 IGKV3D-11A0A0A0MRZ8 115 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 A0A0G2JMM0 328 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 A0A1W2PPB8 328 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 A0A1W2PRS3 328 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 SHISA7A6NL88 538 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 KIR3DP1A8MWS1 328 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 HOXB1P14653 301 aaPredicted RBP13.25□□□□□ -0.29
VARS2-201ENST00000321897 TMEM241Q24JQ0 296 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 C1orf210Q8IVY1 113 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 OR52M1Q8NGK5 317 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 DOCK11Q5JSL3 2073 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 A0A1B0GTI1 187 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 RAB35Q15286 201 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 BSXQ3C1V8 233 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 DPPA3Q6W0C5 159 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 DDA1Q9BW61 102 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 FKBP11Q9NYL4 201 aa13.25□□□□□ -0.29
VARS2-201ENST00000321897 FAM3AP98173 230 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 THADAQ6YHU6 1953 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 OR1K1Q8NGR3 316 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 AQP3Q92482 292 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 GOLT1BQ9Y3E0 138 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 RFNGQ9Y644 331 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 UBE2CO00762 179 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 FUT6P51993 359 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 FAM58AQ8N1B3 248 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 FGF11Q92914 225 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 SLC7A10Q9NS82 523 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 PCNX2A6NKB5 2137 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 C3orf85A0A1B0GTC6 90 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 CD1AP06126 327 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 PITPNC1Q9UKF7 332 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 TP53TG5Q9Y2B4 290 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 EFNA2O43921 213 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 DEDDO75618 318 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 CTSDP07339 412 aaPredicted RBP13.24□□□□□ -0.29
VARS2-201ENST00000321897 PTTG1IPP53801 180 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 PSG4Q00888 419 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 CXorf66Q5JRM2 361 aaPredicted RBP13.24□□□□□ -0.29
VARS2-201ENST00000321897 ATP5SQ99766 215 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 TINAGQ9UJW2 476 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 RPH3ALQ9UNE2 315 aa13.24□□□□□ -0.29
VARS2-201ENST00000321897 ZNF737O75373 536 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 DEFB109BQ30KR1 87 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 LIAT1Q6ZQX7 453 aa13.23□□□□□ -0.29
VARS2-201ENST00000321897 C5orf24Q7Z6I8 188 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms