RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 SCTP09683 121 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 UCP1P25874 307 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 ZNF726P1Q15940 193 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 NCR3LG1Q68D85 454 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 SSX7Q7RTT5 188 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 CLEC18CQ8NCF0 446 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 EXTL1Q92935 676 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 SMIM7Q9BQ49 75 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 VAX2Q9UIW0 290 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 WDFY4Q6ZS81 3184 aa15.37■□□□□ 0.05
PRKCB-202ENST00000321728 ZFAND5O76080 213 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 PATE4P0C8F1 98 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 CRYGSP22914 178 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 LTBRP36941 435 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 NPBWR2P48146 333 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 TLE1Q04724 770 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 MAML2Q8IZL2 1156 aaPredicted RBP15.36■□□□□ 0.05
PRKCB-202ENST00000321728 BEND2Q8NDZ0 799 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 TSTD1Q8NFU3 115 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 EML6Q6ZMW3 1958 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 DUXBA0A1W2PPF3 345 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 SLC22A20A6NK97 555 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 PPP5D1E7EU14 171 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 GCGP01275 180 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 IGLV3-19P01714 112 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 FUT6P51993 359 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 FOXL2NBQ6ZUU3 175 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 P2RX4Q99571 388 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 RBKSQ9H477 322 aa15.36■□□□□ 0.05
PRKCB-202ENST00000321728 CHD3Q12873 2000 aaKnown RBP15.35■□□□□ 0.05
PRKCB-202ENST00000321728 IGHV1OR15-9A0A0B4J2B8 117 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 IL18BPO95998 194 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 G0S2P27469 103 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 IDH3GP51553 393 aaPredicted RBP15.35■□□□□ 0.05
PRKCB-202ENST00000321728 RAB35Q15286 201 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 FAM27BQ5VT28 67 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 SLC25A26Q70HW3 274 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 CALHM1Q8IU99 346 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 OR1F12Q8NHA8 337 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 WNT16Q9UBV4 365 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 HSPB6O14558 160 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 BTF3P20290 206 aaKnown RBP15.35■□□□□ 0.05
PRKCB-202ENST00000321728 LBX1P52954 281 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 IZUMO4Q1ZYL8 232 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 MRGPRGQ86SM5 289 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 IL36GQ9NZH8 169 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 NAT8Q9UHE5 227 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 PRSS50Q9UI38 385 aa15.35■□□□□ 0.05
PRKCB-202ENST00000321728 SYNGR3O43761 229 aa15.34■□□□□ 0.05
PRKCB-202ENST00000321728 KIAA2026Q5HYC2 2103 aa15.34■□□□□ 0.05
PRKCB-202ENST00000321728 ZNF611Q8N823 705 aa15.34■□□□□ 0.05
PRKCB-202ENST00000321728 MBD3L1Q8WWY6 194 aa15.34■□□□□ 0.05
PRKCB-202ENST00000321728 TMEM37Q8WXS4 190 aa15.34■□□□□ 0.05
PRKCB-202ENST00000321728 OR5B12Q96R08 314 aa15.34■□□□□ 0.05
PRKCB-202ENST00000321728 PLK3Q9H4B4 646 aa15.34■□□□□ 0.05
PRKCB-202ENST00000321728 A0A0G2JRQ6 117 aa15.34■□□□□ 0.05
PRKCB-202ENST00000321728 TIAF1O95411 115 aa15.34■□□□□ 0.05
PRKCB-202ENST00000321728 IFNA1P01562 189 aa15.34■□□□□ 0.05
PRKCB-202ENST00000321728 PFN1P07737 140 aaKnown RBP15.34■□□□□ 0.05
PRKCB-202ENST00000321728 HNRNPKP61978 463 aaKnown RBP eCLIP15.34■□□□□ 0.053e-7■■■■■ 30.6
PRKCB-202ENST00000321728 PMS2P11Q13670 270 aa15.34■□□□□ 0.05
PRKCB-202ENST00000321728 TMEM241Q24JQ0 296 aa15.34■□□□□ 0.05
PRKCB-202ENST00000321728 ABLIM2Q6H8Q1 611 aa15.34■□□□□ 0.05
PRKCB-202ENST00000321728 MRPL41Q8IXM3 137 aaKnown RBP15.34■□□□□ 0.05
PRKCB-202ENST00000321728 OR5D13Q8NGL4 314 aa15.34■□□□□ 0.05
PRKCB-202ENST00000321728 NEK7Q8TDX7 302 aa15.34■□□□□ 0.05
PRKCB-202ENST00000321728 RPUSD4Q96CM3 377 aaKnown RBP15.34■□□□□ 0.05
PRKCB-202ENST00000321728 SPACA9Q96E40 222 aaPredicted RBP15.34■□□□□ 0.05
PRKCB-202ENST00000321728 H7BYZ3 331 aa15.33■□□□□ 0.05
PRKCB-202ENST00000321728 CNOT4O95628 575 aaKnown RBP15.33■□□□□ 0.05
PRKCB-202ENST00000321728 METTL15P1P0C7V9 234 aa15.33■□□□□ 0.05
PRKCB-202ENST00000321728 GALR1P47211 349 aa15.33■□□□□ 0.05
PRKCB-202ENST00000321728 ELLP55199 621 aaPredicted RBP15.33■□□□□ 0.05
PRKCB-202ENST00000321728 RAET1LQ5VY80 246 aa15.33■□□□□ 0.05
PRKCB-202ENST00000321728 TMEM42Q69YG0 159 aa15.33■□□□□ 0.05
PRKCB-202ENST00000321728 TMEM68Q96MH6 324 aa15.33■□□□□ 0.05
PRKCB-202ENST00000321728 RASL10BQ96S79 203 aa15.33■□□□□ 0.05
PRKCB-202ENST00000321728 A0A1W2PPQ1 181 aa15.33■□□□□ 0.04
PRKCB-202ENST00000321728 MAP1LC3B2A6NCE7 125 aa15.33■□□□□ 0.04
PRKCB-202ENST00000321728 ZNF737O75373 536 aa15.33■□□□□ 0.04
PRKCB-202ENST00000321728 MMP7P09237 267 aaPredicted RBP15.33■□□□□ 0.04
PRKCB-202ENST00000321728 IAPPP10997 89 aa15.33■□□□□ 0.04
PRKCB-202ENST00000321728 GZMHP20718 246 aa15.33■□□□□ 0.04
PRKCB-202ENST00000321728 FKBP2P26885 142 aaKnown RBP15.33■□□□□ 0.04
PRKCB-202ENST00000321728 MDH2P40926 338 aaKnown RBP15.33■□□□□ 0.04
PRKCB-202ENST00000321728 ZNF92Q03936 586 aa15.33■□□□□ 0.04
PRKCB-202ENST00000321728 TNFRSF9Q07011 255 aa15.33■□□□□ 0.04
PRKCB-202ENST00000321728 CYB5R2Q6BCY4 276 aa15.33■□□□□ 0.04
PRKCB-202ENST00000321728 OR51H1Q8NH63 302 aa15.33■□□□□ 0.04
PRKCB-202ENST00000321728 PCGF1Q9BSM1 259 aa15.33■□□□□ 0.04
PRKCB-202ENST00000321728 MAP1LC3BQ9GZQ8 125 aa15.33■□□□□ 0.04
PRKCB-202ENST00000321728 RNF150Q9ULK6 438 aa15.33■□□□□ 0.04
PRKCB-202ENST00000321728 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.32■□□□□ 0.04
PRKCB-202ENST00000321728 OR4A8P0C604 315 aa15.32■□□□□ 0.04
PRKCB-202ENST00000321728 HERPUD1Q15011 391 aa15.32■□□□□ 0.04
PRKCB-202ENST00000321728 BSXQ3C1V8 233 aa15.32■□□□□ 0.04
PRKCB-202ENST00000321728 RHBDD2Q6NTF9 364 aa15.32■□□□□ 0.04
PRKCB-202ENST00000321728 FADS6Q8N9I5 356 aa15.32■□□□□ 0.04
PRKCB-202ENST00000321728 GPR146Q96CH1 333 aa15.32■□□□□ 0.04
PRKCB-202ENST00000321728 RAB40CQ96S21 281 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms