RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 MARVELD3Q96A59 401 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 IFT22Q9H7X7 185 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 RHOFQ9HBH0 211 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 TRAPPC2LQ9UL33 140 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 PCDHB10Q9UN67 800 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 SESN1Q9Y6P5 492 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.41□□□□□ -1.38
IFT88-201ENST00000319980 WNT9BO14905 357 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 SCO1O75880 301 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 CRYABP02511 175 aaKnown RBP6.41□□□□□ -1.38
IFT88-201ENST00000319980 GLAP06280 429 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 HKR1P10072 659 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 RPL12P30050 165 aaKnown RBP6.41□□□□□ -1.38
IFT88-201ENST00000319980 ZNF146Q15072 292 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 ZNF718Q3SXZ3 478 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 ZNF474Q6S9Z5 364 aaPredicted RBP6.41□□□□□ -1.38
IFT88-201ENST00000319980 C1orf122Q6ZSJ8 110 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 LDLRAD3Q86YD5 345 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 CMTM1Q8IZ96 169 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 OR4A4PQ8NGN8 299 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 STOML3Q8TAV4 291 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 ABHD17AQ96GS6 310 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 TMEM222Q9H0R3 208 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 DUSP13Q9UII6 198 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 ERRFI1Q9UJM3 462 aaPredicted RBP6.41□□□□□ -1.38
IFT88-201ENST00000319980 SLC25A15Q9Y619 301 aa6.41□□□□□ -1.38
IFT88-201ENST00000319980 TRBV6-6A0A0A6YYG2 114 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 TMEM210A6NLX4 147 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 MKRN2OSH3BPM6 223 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 H7C1Q1 480 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 ZNF83P51522 516 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 HLA-DRB3P79483 266 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 NAAAQ02083 359 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 FOXC1Q12948 553 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 PRAMEF6Q5VXH4 476 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 CLEC9AQ6UXN8 241 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 Q6ZR03 302 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 ZNF695Q8IW36 515 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 C11orf53Q8IXP5 236 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 FAM185AQ8N0U4 392 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 S100PBPQ96BU1 408 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 LINC00052Q96N35 136 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 TAS2R3Q9NYW6 316 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 OR1A1Q9P1Q5 309 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 OR2W1Q9Y3N9 320 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 TMED3Q9Y3Q3 217 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 ESPL1Q14674 2120 aa6.4□□□□□ -1.38
IFT88-201ENST00000319980 CADP27708 2225 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 NBEAQ8NFP9 2946 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 A0A1B0GW55 424 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 J3KRW8 73 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 SHOXO15266 292 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 HSPA12AO43301 675 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 PSPNO60542 156 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 HAND1O96004 215 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 DUX4L2P0CJ85 424 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 DUX4L3P0CJ86 424 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 DUX4L4P0CJ87 422 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 DUX4L5P0CJ88 424 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 DUX4L6P0CJ89 424 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 DUX4L7P0CJ90 424 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 TMEM33P57088 247 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 RPL7L1Q6DKI1 246 aaKnown RBP6.4□□□□□ -1.39
IFT88-201ENST00000319980 ZNF880Q6PDB4 577 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 ZNF497Q6ZNH5 498 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 SMIM3Q9BZL3 60 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 CXXC4Q9H2H0 198 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 NARFLQ9H6Q4 476 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 BARX1Q9HBU1 254 aaPredicted RBP6.4□□□□□ -1.39
IFT88-201ENST00000319980 DUX4Q9UBX2 424 aa6.4□□□□□ -1.39
IFT88-201ENST00000319980 A8MXK9 166 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 M0R1B8 84 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 FGF2P09038 288 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 PF4V1P10720 104 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 MDH2P40926 338 aaKnown RBP6.39□□□□□ -1.39
IFT88-201ENST00000319980 C1orf185Q5T7R7 199 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 ZNF324BQ6AW86 544 aaPredicted RBP6.39□□□□□ -1.39
IFT88-201ENST00000319980 FIP1L1Q6UN15 594 aaKnown RBP6.39□□□□□ -1.39
IFT88-201ENST00000319980 FAM180AQ6UWF9 173 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 SPERTQ8NA61 448 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 BVESQ8NE79 360 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 TREM2Q9NZC2 230 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 TAAR3PQ9P1P4 343 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 AMDHD2Q9Y303 409 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 RBM7Q9Y580 266 aaKnown RBP6.39□□□□□ -1.39
IFT88-201ENST00000319980 NKX2-6A6NCS4 301 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 E5RGE8 158 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 ST8SIA3O43173 380 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 PGLYRP1O75594 196 aaPredicted RBP6.39□□□□□ -1.39
IFT88-201ENST00000319980 CDS2O95674 445 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 CRYZL1O95825 349 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 TFF1P04155 84 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 KITLGP21583 273 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 BMP5P22003 454 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 TUBG1P23258 451 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 SRPXP78539 464 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 VHLLQ6RSH7 139 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 WDR82Q6UXN9 313 aa6.39□□□□□ -1.39
IFT88-201ENST00000319980 HSD17B13Q7Z5P4 300 aaPredicted RBP6.39□□□□□ -1.39
IFT88-201ENST00000319980 H1FOOQ8IZA3 346 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms