RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 SIGLEC12Q96PQ1 595 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 PLA2G3Q9NZ20 509 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 IGKV1-27A0A075B6S5 117 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 C9orf172C9J069 976 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 SLC33A1O00400 549 aaPredicted RBP16.69■□□□□ 0.26
ZNF554-201ENST00000317243 ZNF32P17041 273 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 FOXG1P55316 489 aaPredicted RBP16.69■□□□□ 0.26
ZNF554-201ENST00000317243 RPL23AP62750 156 aaKnown RBP16.69■□□□□ 0.26
ZNF554-201ENST00000317243 SLC16A14Q7RTX9 510 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 THOC3Q96J01 351 aaKnown RBP16.69■□□□□ 0.26
ZNF554-201ENST00000317243 NECAP2Q9NVZ3 263 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 ZNF716A6NP11 495 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 DVL1O14640 695 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 PHF1O43189 567 aaPredicted RBP16.69■□□□□ 0.26
ZNF554-201ENST00000317243 IGLV3-1P01715 115 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 MPLP40238 635 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 CD200P41217 278 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 ALDH3B1P43353 468 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 SLC10A1Q14973 349 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 SLC35E3Q7Z769 313 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 SNIP1Q8TAD8 396 aaKnown RBP16.69■□□□□ 0.26
ZNF554-201ENST00000317243 Q96M66 194 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 SLC2A9Q9NRM0 540 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 SLC7A11Q9UPY5 501 aa16.69■□□□□ 0.26
ZNF554-201ENST00000317243 ARL6IP1Q15041 203 aa16.68■□□□□ 0.26
ZNF554-201ENST00000317243 FBXL14Q8N1E6 418 aa16.68■□□□□ 0.26
ZNF554-201ENST00000317243 PP6455Q8WZ26 134 aa16.68■□□□□ 0.26
ZNF554-201ENST00000317243 SNHG12Q9BXW3 62 aa16.68■□□□□ 0.26
ZNF554-201ENST00000317243 HSF4Q9ULV5 492 aa16.68■□□□□ 0.26
ZNF554-201ENST00000317243 C3orf80F5H4A9 247 aa16.68■□□□□ 0.26
ZNF554-201ENST00000317243 RRP8O43159 456 aaKnown RBP16.68■□□□□ 0.26
ZNF554-201ENST00000317243 HSPB1P04792 205 aaKnown RBP16.68■□□□□ 0.26
ZNF554-201ENST00000317243 CCL2P13500 99 aa16.68■□□□□ 0.26
ZNF554-201ENST00000317243 RUNX1Q01196 453 aa16.68■□□□□ 0.26
ZNF554-201ENST00000317243 IL13RA2Q14627 380 aa16.68■□□□□ 0.26
ZNF554-201ENST00000317243 CEACAM16Q2WEN9 425 aa16.68■□□□□ 0.26
ZNF554-201ENST00000317243 C6orf15Q6UXA7 325 aaPredicted RBP16.68■□□□□ 0.26
ZNF554-201ENST00000317243 TMEM183AQ8IXX5 376 aa16.68■□□□□ 0.26
ZNF554-201ENST00000317243 BEND2Q8NDZ0 799 aa16.68■□□□□ 0.26
ZNF554-201ENST00000317243 BOD1Q96IK1 185 aa16.68■□□□□ 0.26
ZNF554-201ENST00000317243 MGAQ8IWI9 3026 aa16.67■□□□□ 0.26
ZNF554-201ENST00000317243 DUSP1P28562 367 aa16.67■□□□□ 0.26
ZNF554-201ENST00000317243 OTX1P32242 354 aaPredicted RBP16.67■□□□□ 0.26
ZNF554-201ENST00000317243 ZNF133P52736 654 aaPredicted RBP16.67■□□□□ 0.26
ZNF554-201ENST00000317243 RAC3P60763 192 aa16.67■□□□□ 0.26
ZNF554-201ENST00000317243 C3AR1Q16581 482 aa16.67■□□□□ 0.26
ZNF554-201ENST00000317243 TMEM171Q8WVE6 324 aa16.67■□□□□ 0.26
ZNF554-201ENST00000317243 V9GYS6 101 aa16.67■□□□□ 0.26
ZNF554-201ENST00000317243 LCATP04180 440 aa16.67■□□□□ 0.26
ZNF554-201ENST00000317243 RAB11AP62491 216 aa16.67■□□□□ 0.26
ZNF554-201ENST00000317243 GNMTQ14749 295 aa16.67■□□□□ 0.26
ZNF554-201ENST00000317243 ZNF506Q5JVG8 444 aa16.67■□□□□ 0.26
ZNF554-201ENST00000317243 OR4X1Q8NH49 305 aa16.67■□□□□ 0.26
ZNF554-201ENST00000317243 RCC1LQ96I51 464 aaKnown RBP16.67■□□□□ 0.26
ZNF554-201ENST00000317243 METTL9Q9H1A3 318 aa16.67■□□□□ 0.26
ZNF554-201ENST00000317243 DCHS1Q96JQ0 3298 aa16.67■□□□□ 0.26
ZNF554-201ENST00000317243 FAM166BA8MTA8 275 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 ZNF25P17030 456 aaPredicted RBP16.66■□□□□ 0.26
ZNF554-201ENST00000317243 SRD5A2P31213 254 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 HIST1H3AP68431 136 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 PIGYQ3MUY2 71 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 LIAT1Q6ZQX7 453 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 AAED1Q7RTV5 226 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 OR2C3Q8N628 320 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 CLDND2Q8NHS1 167 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 PPP1R14DQ9NXH3 145 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 IGSF23A1L1A6 192 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 CLDN34H7C241 214 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 VAMP5O95183 116 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 CTSSP25774 331 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 PSG4Q00888 419 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 RTL6Q6ICC9 239 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 LINC00696Q6ZRV3 163 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 FOXL2NBQ6ZUU3 175 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 CABLES2Q9BTV7 478 aa16.66■□□□□ 0.26
ZNF554-201ENST00000317243 CNOT1A5YKK6 2376 aaKnown RBP16.66■□□□□ 0.26
ZNF554-201ENST00000317243 PCNX2A6NKB5 2137 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 SYNGR3O43761 229 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 CRYGSP22914 178 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 ACP1P24666 158 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 ZNF266Q14584 549 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 FAM27BQ5VT28 67 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 SLC35G3Q8N808 338 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 ACTR3CQ9C0K3 210 aaPredicted RBP16.65■□□□□ 0.26
ZNF554-201ENST00000317243 DECR2Q9NUI1 292 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 LRFN1Q9P244 771 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 SMG1Q96Q15 3661 aaKnown RBP16.65■□□□□ 0.26
ZNF554-201ENST00000317243 A0A096LPE4 126 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 A0A1W2PPZ6 126 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 MMP7P09237 267 aaPredicted RBP16.65■□□□□ 0.26
ZNF554-201ENST00000317243 TMEM217Q8N7C4 229 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 C18orf12Q96KH6 178 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 SGCZQ96LD1 299 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 MAGT1Q9H0U3 335 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 TMEM38BQ9NVV0 291 aa16.65■□□□□ 0.26
ZNF554-201ENST00000317243 A0A0U1RQV5 110 aa16.64■□□□□ 0.25
ZNF554-201ENST00000317243 NXPH3O95157 252 aa16.64■□□□□ 0.25
ZNF554-201ENST00000317243 MBP02144 154 aa16.64■□□□□ 0.25
ZNF554-201ENST00000317243 CYC1P08574 325 aa16.64■□□□□ 0.25
ZNF554-201ENST00000317243 MMP9P14780 707 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms