RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 METTL1Q9UBP6 276 aaKnown RBP7.73□□□□□ -1.17
USF3-201ENST00000316407 TBL2Q9Y4P3 447 aaKnown RBP7.73□□□□□ -1.17
USF3-201ENST00000316407 KIAA1549Q9HCM3 1950 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 TSPAN2O60636 221 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 GAPTQ8N292 157 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 OR13G1Q8NGZ3 307 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 SLC37A2Q8TED4 501 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 KLK15Q9H2R5 256 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 MICBQ29980 383 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 ZNF260Q3ZCT1 412 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 OR8G5Q8NG78 346 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 MRPL30Q8TCC3 161 aaKnown RBP7.73□□□□□ -1.17
USF3-201ENST00000316407 PP6455Q8WZ26 134 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 SLC45A1Q9Y2W3 748 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 A0A0B4J293 547 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 C7orf71A4D174 169 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 GBGT1Q8N5D6 347 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 NRIP2Q9BQI9 281 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 GNG7O60262 68 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 GP1BAP07359 652 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 RELBQ01201 579 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 TMEM208Q9BTX3 173 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 LAT2Q9GZY6 243 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 SELENOKQ9Y6D0 94 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 RBBP6Q7Z6E9 1792 aaKnown RBP7.73□□□□□ -1.17
USF3-201ENST00000316407 A0A087WUJ7 227 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 C3orf80F5H4A9 247 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 P2RY1P47900 373 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 IFITM3Q01628 133 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 ZNF519Q8TB69 540 aa7.73□□□□□ -1.17
USF3-201ENST00000316407 MRPL24Q96A35 216 aaKnown RBP7.73□□□□□ -1.17
USF3-201ENST00000316407 KIAA1644Q3SXP7 199 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 C10orf113Q5VZT2 155 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 RBPMS2Q6ZRY4 209 aaKnown RBP7.72□□□□□ -1.17
USF3-201ENST00000316407 RPEQ96AT9 228 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 CKS1BP61024 79 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 H0YL77 283 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 K7ESF4 209 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 NDUFB4O95168 129 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 KLF9Q13886 244 aaPredicted RBP7.72□□□□□ -1.17
USF3-201ENST00000316407 SFTA2Q6UW10 78 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 ZNF788Q6ZQV5 615 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 CHRNA10Q9GZZ6 450 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 MRPL18Q9H0U6 180 aaKnown RBP7.72□□□□□ -1.17
USF3-201ENST00000316407 SLC17A5Q9NRA2 495 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 CLN8Q9UBY8 286 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 TBX21Q9UL17 535 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 ATP23Q9Y6H3 246 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 DOCK4Q8N1I0 1966 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 IGKV6D-21A0A0A0MT36 114 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 HDHD3Q9BSH5 251 aaPredicted RBP7.72□□□□□ -1.17
USF3-201ENST00000316407 SIGLEC7Q9Y286 467 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 KLRC4-KLRK1H3BQV0 150 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 HIST1H1BP16401 226 aaKnown RBP7.72□□□□□ -1.17
USF3-201ENST00000316407 PAFAH1B2P68402 229 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 PIGYQ3MUY2 71 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 KHDC3LQ587J8 217 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 THSD4Q6ZMP0 1018 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 WDFY1Q8IWB7 410 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 ARID2Q68CP9 1835 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 SH2D7A6NKC9 451 aaPredicted RBP7.72□□□□□ -1.17
USF3-201ENST00000316407 CADM4Q8NFZ8 388 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 SMOC1Q9H4F8 434 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 SAP30LQ9HAJ7 183 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 CGB1A6NKQ9 187 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 CDC42EP2O14613 210 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 PGFP49763 221 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 ZNF345Q14585 488 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 OR5AC2Q9NZP5 309 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 DNASE2O00115 360 aaPredicted RBP7.72□□□□□ -1.17
USF3-201ENST00000316407 DHRS3O75911 302 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 PGLYRP4Q96LB8 373 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 NUDT16L1Q9BRJ7 211 aaKnown RBP7.72□□□□□ -1.17
USF3-201ENST00000316407 STARD10Q9Y365 291 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 GAB4Q2WGN9 574 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 PCOLCE2Q9UKZ9 415 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 NGFP01138 241 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 FCGR3AP08637 254 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 DEFB103AP81534 67 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 TIMD4Q96H15 378 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 HELZP42694 1942 aaKnown RBP7.72□□□□□ -1.17
USF3-201ENST00000316407 TREM2Q9NZC2 230 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 IL36RNQ9UBH0 155 aa7.72□□□□□ -1.17
USF3-201ENST00000316407 EFNB2P52799 333 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 KLF3P57682 345 aaPredicted RBP7.71□□□□□ -1.17
USF3-201ENST00000316407 RPL30P62888 115 aaKnown RBP7.71□□□□□ -1.17
USF3-201ENST00000316407 RPS4Y2Q8TD47 263 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 TINAGQ9UJW2 476 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 hADV38S2A0JD32 116 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 LEPROTL1O95214 131 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 CXorf1O96002 111 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 SRIP30626 198 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 CDKN2AP42771 156 aaKnown RBP7.71□□□□□ -1.17
USF3-201ENST00000316407 IFITM2Q01629 132 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 FOXF1Q12946 379 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 TMEM56Q96MV1 263 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 PSME4Q14997 1843 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 HSPB2A8KAH6 182 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 B4GALNT1Q00973 533 aa7.71□□□□□ -1.17
USF3-201ENST00000316407 HSPB2Q16082 182 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms