RNA–Protein interactions for RNA: ENST00000308862.10

PIKFYVE-202, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 1,640 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-202ENST00000308862 RAB3DO95716 219 aa12.8□□□□□ -0.36
PIKFYVE-202ENST00000308862 PMP2P02689 132 aa12.8□□□□□ -0.36
PIKFYVE-202ENST00000308862 CD74P04233 296 aa12.8□□□□□ -0.36
PIKFYVE-202ENST00000308862 SEC61A1P61619 476 aaKnown RBP12.8□□□□□ -0.36
PIKFYVE-202ENST00000308862 C6orf183Q5T699 404 aa12.8□□□□□ -0.36
PIKFYVE-202ENST00000308862 OR5AP2Q8NGF4 316 aa12.8□□□□□ -0.36
PIKFYVE-202ENST00000308862 C7orf50Q9BRJ6 194 aaKnown RBP12.8□□□□□ -0.36
PIKFYVE-202ENST00000308862 DCTN5Q9BTE1 182 aa12.8□□□□□ -0.36
PIKFYVE-202ENST00000308862 C11orf54Q9H0W9 315 aaPredicted RBP12.8□□□□□ -0.36
PIKFYVE-202ENST00000308862 NCOR1P1Q9H4R4 102 aa12.8□□□□□ -0.36
PIKFYVE-202ENST00000308862 HRASLSQ9HDD0 168 aa12.8□□□□□ -0.36
PIKFYVE-202ENST00000308862 KCNIP1Q9NZI2 227 aa12.8□□□□□ -0.36
PIKFYVE-202ENST00000308862 OR6C3Q9NZP0 311 aa12.8□□□□□ -0.36
PIKFYVE-202ENST00000308862 CLN8Q9UBY8 286 aa12.8□□□□□ -0.36
PIKFYVE-202ENST00000308862 ABCA12Q86UK0 2595 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 IGHV4-30-2A0A087WSY4 118 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 TRGV10A0A0A0MS01 117 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 CENPXA8MT69 81 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 VWC2LB2RUY7 222 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 FABP7O15540 132 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 IGHV2-5P01817 119 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 OR3A3P47888 321 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 HMGN3Q15651 99 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 CLEC12BQ2HXU8 276 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 WDR25Q64LD2 544 aaPredicted RBP12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 TRAT1Q6PIZ9 186 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 TCF23Q7RTU1 214 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 CLDND2Q8NHS1 167 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 TINAGL1Q9GZM7 467 aaPredicted RBP12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 TAF9BQ9HBM6 251 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 C19orf12Q9NSK7 152 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 MCUBQ9NWR8 336 aa12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 ANKRD17O75179 2603 aaKnown RBP12.79□□□□□ -0.36
PIKFYVE-202ENST00000308862 C12orf77C9JDV5 145 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 GPR37O15354 613 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 AMY2AP04746 511 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 SCTP09683 121 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 GSTT2P0CG29 244 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 SSTR5P35346 364 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 NPY4RP50391 375 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 GNB2P62879 340 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 RPL31P62899 125 aaKnown RBP12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 MEF2CQ06413 473 aaPredicted RBP12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 MEF2DQ14814 521 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 CDK10Q15131 360 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 ESCO2Q56NI9 601 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 MZT2BQ6NZ67 158 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 C5orf24Q7Z6I8 188 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 FAM185AQ8N0U4 392 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 PRR18Q8N4B5 295 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 OR4A4PQ8NGN8 299 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 OR56B4Q8NH76 319 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 UBALD1Q8TB05 177 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 SSBP3Q9BWW4 388 aaPredicted RBP12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 NECAP2Q9NVZ3 263 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 EHFQ9NZC4 300 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 LPAR3Q9UBY5 353 aa12.78□□□□□ -0.36
PIKFYVE-202ENST00000308862 TRBV23-1A0A0A0MS06 115 aa12.77□□□□□ -0.36
PIKFYVE-202ENST00000308862 hADV38S2A0JD32 116 aa12.77□□□□□ -0.36
PIKFYVE-202ENST00000308862 NAP1L6A6NFF2 107 aa12.77□□□□□ -0.36
PIKFYVE-202ENST00000308862 RFX2P48378 723 aa12.77□□□□□ -0.36
PIKFYVE-202ENST00000308862 Q5PR19 223 aa12.77□□□□□ -0.36
PIKFYVE-202ENST00000308862 VAX1Q5SQQ9 334 aa12.77□□□□□ -0.36
PIKFYVE-202ENST00000308862 ZNF554Q86TJ5 538 aa12.77□□□□□ -0.36
PIKFYVE-202ENST00000308862 ZNF565Q8N9K5 539 aa12.77□□□□□ -0.36
PIKFYVE-202ENST00000308862 RAB39BQ96DA2 213 aa12.77□□□□□ -0.36
PIKFYVE-202ENST00000308862 KIRREL1Q96J84 757 aa12.77□□□□□ -0.36
PIKFYVE-202ENST00000308862 LINC00312Q9Y6C7 94 aa12.77□□□□□ -0.36
PIKFYVE-202ENST00000308862 SPG11Q96JI7 2443 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 DSCAML1Q8TD84 2053 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 IGHV4-61A0A0C4DH41 118 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 SDCBPO00560 298 aaPredicted RBP12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 PHF1O43189 567 aaPredicted RBP12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 PTTG1O95997 202 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 HBZP02008 142 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 IFNA6P05013 189 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 SLC25A16P16260 332 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 BTCP35070 178 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 ZNF273Q14593 569 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 HERPUD1Q15011 391 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 CR1LQ2VPA4 569 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 IGSF11Q5DX21 431 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 BTN2A1Q7KYR7 527 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 IL1F10Q8WWZ1 152 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 CABLES2Q9BTV7 478 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 CALYQ9NYX4 217 aa12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 UBE2J1Q9Y385 318 aaPredicted RBP12.77□□□□□ -0.37
PIKFYVE-202ENST00000308862 CSMD2Q7Z408 3487 aa12.76□□□□□ -0.37
PIKFYVE-202ENST00000308862 POLQO75417 2590 aa12.76□□□□□ -0.37
PIKFYVE-202ENST00000308862 IGKV1-6A0A0C4DH72 117 aa12.76□□□□□ -0.37
PIKFYVE-202ENST00000308862 DISC1C4P0D8 188 aa12.76□□□□□ -0.37
PIKFYVE-202ENST00000308862 C15orf65H3BRN8 121 aa12.76□□□□□ -0.37
PIKFYVE-202ENST00000308862 BET1O15155 118 aa12.76□□□□□ -0.37
PIKFYVE-202ENST00000308862 SPINT2O43291 252 aa12.76□□□□□ -0.37
PIKFYVE-202ENST00000308862 OR5H8P0DN80 308 aa12.76□□□□□ -0.37
PIKFYVE-202ENST00000308862 GZMHP20718 246 aa12.76□□□□□ -0.37
PIKFYVE-202ENST00000308862 LMO4P61968 165 aa12.76□□□□□ -0.37
PIKFYVE-202ENST00000308862 ZNF782Q6ZMW2 699 aaPredicted RBP12.76□□□□□ -0.37
PIKFYVE-202ENST00000308862 OVCH2Q7RTZ1 564 aa12.76□□□□□ -0.37
PIKFYVE-202ENST00000308862 ARRDC1Q8N5I2 433 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms