RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 CKLFQ9UBR5 152 aa15.82■□□□□ 0.12
PDZRN3-202ENST00000308537 OOSP1A8MZH6 123 aa15.81■□□□□ 0.12
PDZRN3-202ENST00000308537 OR2F2O95006 317 aa15.81■□□□□ 0.12
PDZRN3-202ENST00000308537 MT-ND4P03905 459 aa15.81■□□□□ 0.12
PDZRN3-202ENST00000308537 CSF1P09603 554 aa15.81■□□□□ 0.12
PDZRN3-202ENST00000308537 CD37P11049 281 aa15.81■□□□□ 0.12
PDZRN3-202ENST00000308537 PRRX1P54821 245 aa15.81■□□□□ 0.12
PDZRN3-202ENST00000308537 LOXL3P58215 753 aa15.81■□□□□ 0.12
PDZRN3-202ENST00000308537 DTX3Q8N9I9 347 aa15.81■□□□□ 0.12
PDZRN3-202ENST00000308537 FAM110DQ8TAY7 271 aaPredicted RBP15.81■□□□□ 0.12
PDZRN3-202ENST00000308537 CREB3L1Q96BA8 519 aa15.81■□□□□ 0.12
PDZRN3-202ENST00000308537 RBM14Q96PK6 669 aaKnown RBP15.81■□□□□ 0.12
PDZRN3-202ENST00000308537 DUSP21Q9H596 190 aa15.81■□□□□ 0.12
PDZRN3-202ENST00000308537 ERGIC3Q9Y282 383 aa15.81■□□□□ 0.12
PDZRN3-202ENST00000308537 TMEM30CPA0ZSE6 113 aa15.8■□□□□ 0.12
PDZRN3-202ENST00000308537 TOR1AO14656 332 aa15.8■□□□□ 0.12
PDZRN3-202ENST00000308537 ATP6V1G2O95670 118 aa15.8■□□□□ 0.12
PDZRN3-202ENST00000308537 BRS3P32247 399 aa15.8■□□□□ 0.12
PDZRN3-202ENST00000308537 CEACAM3P40198 252 aa15.8■□□□□ 0.12
PDZRN3-202ENST00000308537 LRRTM1Q86UE6 522 aa15.8■□□□□ 0.12
PDZRN3-202ENST00000308537 JAGN1Q8N5M9 183 aa15.8■□□□□ 0.12
PDZRN3-202ENST00000308537 MRPS24Q96EL2 167 aaKnown RBP15.8■□□□□ 0.12
PDZRN3-202ENST00000308537 Q96M66 194 aa15.8■□□□□ 0.12
PDZRN3-202ENST00000308537 SLC25A33Q9BSK2 321 aa15.8■□□□□ 0.12
PDZRN3-202ENST00000308537 TPRKBQ9Y3C4 175 aa15.8■□□□□ 0.12
PDZRN3-202ENST00000308537 PTGES3LE9PB15 166 aa15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 MYF6P23409 242 aa15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 VHLP40337 213 aa15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 GPR176Q14439 515 aa15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 RBM39Q14498 530 aaKnown RBP15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 LTC4SQ16873 150 aa15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 TCTEX1D4Q5JR98 221 aa15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 ATAD3CQ5T2N8 411 aa15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 AWAT2Q6E213 333 aa15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 IZUMO2Q6UXV1 221 aa15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 SLC16A12Q6ZSM3 486 aa15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 LYG1Q8N1E2 194 aa15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 UBALD1Q8TB05 177 aa15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 S100A13Q99584 98 aa15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 MND1Q9BWT6 205 aa15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 BANF2Q9H503 90 aa15.79■□□□□ 0.12
PDZRN3-202ENST00000308537 A0A1W2PPE3 182 aa15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 SH2D7A6NKC9 451 aaPredicted RBP15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 ORC5O43913 435 aa15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 FBXO24O75426 580 aa15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 MGMTP16455 207 aa15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 GZMHP20718 246 aa15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 SPHARQ15513 63 aa15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 ACSM3Q53FZ2 586 aa15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 PDLIM3Q53GG5 364 aaPredicted RBP15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 THNSL2Q86YJ6 484 aa15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 LINC00311Q8N616 119 aa15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 NKAIN3Q8N8D7 197 aa15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 OR52M1Q8NGK5 317 aa15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 CCDC107Q8WV48 283 aa15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 CITED2Q99967 270 aaPredicted RBP15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 UQCC2Q9BRT2 126 aa15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 ANKRD60Q9BZ19 345 aa15.78■□□□□ 0.12
PDZRN3-202ENST00000308537 FAM90A10PA6NDY2 464 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 FAM90A7PA6NKC0 464 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 FAM90A23PA8MXZ1 464 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 C12orf77C9JDV5 145 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 OPN1MWP04001 364 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 OPN1MW2P0DN77 364 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 OPN1MW3P0DN78 364 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 VDAC2P45880 294 aaPredicted RBP15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 GNG10P50151 68 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 CD83Q01151 205 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 RAB12Q6IQ22 244 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 CCDC144NLQ6NUI1 221 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 MS4A15Q8N5U1 240 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 ZNF439Q8NDP4 499 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 OR56B4Q8NH76 319 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 TOMM40LQ969M1 308 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 ARL11Q969Q4 196 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 ST6GALNAC6Q969X2 333 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 RPEQ96AT9 228 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 PCDHB16Q9NRJ7 776 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 GFOD1Q9NXC2 390 aa15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 AMMECR1Q9Y4X0 333 aaPredicted RBP15.77■□□□□ 0.12
PDZRN3-202ENST00000308537 SNRNP70P08621 437 aaKnown RBP15.76■□□□□ 0.11
PDZRN3-202ENST00000308537 MAPK3P27361 379 aaPredicted RBP15.76■□□□□ 0.11
PDZRN3-202ENST00000308537 MADCAM1Q13477 382 aa15.76■□□□□ 0.11
PDZRN3-202ENST00000308537 ABCA11PQ4W5N1 156 aa15.76■□□□□ 0.11
PDZRN3-202ENST00000308537 C1orf100Q5SVJ3 147 aa15.76■□□□□ 0.11
PDZRN3-202ENST00000308537 TMEM91Q6ZNR0 172 aa15.76■□□□□ 0.11
PDZRN3-202ENST00000308537 DRAM1Q8N682 238 aa15.76■□□□□ 0.11
PDZRN3-202ENST00000308537 C8orf31Q8N9H6 132 aa15.76■□□□□ 0.11
PDZRN3-202ENST00000308537 THRSPQ92748 146 aa15.76■□□□□ 0.11
PDZRN3-202ENST00000308537 GFI1Q99684 422 aa15.76■□□□□ 0.11
PDZRN3-202ENST00000308537 TMED9Q9BVK6 235 aa15.76■□□□□ 0.11
PDZRN3-202ENST00000308537 SELENOIQ9C0D9 397 aa15.76■□□□□ 0.11
PDZRN3-202ENST00000308537 Q9H521 79 aa15.76■□□□□ 0.11
PDZRN3-202ENST00000308537 SPACA1Q9HBV2 294 aa15.76■□□□□ 0.11
PDZRN3-202ENST00000308537 RAB26Q9ULW5 256 aa15.76■□□□□ 0.11
PDZRN3-202ENST00000308537 AIPO00170 330 aa15.75■□□□□ 0.11
PDZRN3-202ENST00000308537 SLC31A2O15432 143 aa15.75■□□□□ 0.11
PDZRN3-202ENST00000308537 UCHL1P09936 223 aa15.75■□□□□ 0.11
PDZRN3-202ENST00000308537 MNDAP41218 407 aa15.75■□□□□ 0.11
PDZRN3-202ENST00000308537 QRFPP83859 136 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms