RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 PPP1R35Q8TAP8 253 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 PLA2G12AQ9BZM1 189 aa13.48□□□□□ -0.25
LEMD3-201ENST00000308330 TRAV17A0A0B4J275 112 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 SNURFLB1AK76 121 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 HOXA6P31267 233 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 ZNF506Q5JVG8 444 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 ABHD5Q8WTS1 349 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 RBKSQ9H477 322 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 SDCBPO00560 298 aaPredicted RBP13.47□□□□□ -0.25
LEMD3-201ENST00000308330 CHEK1O14757 476 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 PRSS41Q7RTY9 318 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 WFDC8Q8IUA0 241 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 NHLRC2Q8NBF2 726 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 OR4X1Q8NH49 305 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 NMNAT3Q96T66 252 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 MAP1LC3CQ9BXW4 147 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 HLA-GP17693 338 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 TCL1AP56279 114 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 H1FNTQ75WM6 255 aaPredicted RBP13.47□□□□□ -0.25
LEMD3-201ENST00000308330 SLC22A24Q8N4F4 322 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 NT5CQ8TCD5 201 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 EMC6Q9BV81 110 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 PLSCR2Q9NRY7 297 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 TMEM106BQ9NUM4 274 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 HMGN4O00479 90 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 OR5AL1P0C617 328 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 APOBEC1P41238 236 aaKnown RBP13.47□□□□□ -0.25
LEMD3-201ENST00000308330 WDR5BQ86VZ2 330 aa13.47□□□□□ -0.25
LEMD3-201ENST00000308330 NEIL1Q96FI4 390 aaPredicted RBP13.47□□□□□ -0.25
LEMD3-201ENST00000308330 COL6A6A6NMZ7 2263 aa13.46□□□□□ -0.25
LEMD3-201ENST00000308330 BLVRBP30043 206 aaPredicted RBP13.46□□□□□ -0.25
LEMD3-201ENST00000308330 PLCXD3Q63HM9 321 aa13.46□□□□□ -0.25
LEMD3-201ENST00000308330 MSRB3Q8IXL7 192 aa13.46□□□□□ -0.25
LEMD3-201ENST00000308330 BHLHE23Q8NDY6 225 aa13.46□□□□□ -0.25
LEMD3-201ENST00000308330 CLEC18AA5D8T8 446 aa13.46□□□□□ -0.25
LEMD3-201ENST00000308330 SIRPB1O00241 398 aa13.46□□□□□ -0.25
LEMD3-201ENST00000308330 CXCL13O43927 109 aa13.46□□□□□ -0.25
LEMD3-201ENST00000308330 HOXB9P17482 250 aaPredicted RBP13.46□□□□□ -0.25
LEMD3-201ENST00000308330 COX5AP20674 150 aa13.46□□□□□ -0.25
LEMD3-201ENST00000308330 FOXL2P58012 376 aa13.46□□□□□ -0.25
LEMD3-201ENST00000308330 OR2C3Q8N628 320 aa13.46□□□□□ -0.25
LEMD3-201ENST00000308330 CLEC18CQ8NCF0 446 aa13.46□□□□□ -0.25
LEMD3-201ENST00000308330 GPR32P1Q8NGA4 272 aa13.46□□□□□ -0.25
LEMD3-201ENST00000308330 PIGCQ92535 297 aa13.46□□□□□ -0.25
LEMD3-201ENST00000308330 HES4Q9HCC6 221 aa13.46□□□□□ -0.25
LEMD3-201ENST00000308330 NEU3Q9UQ49 428 aa13.46□□□□□ -0.25
LEMD3-201ENST00000308330 EGR3Q06889 387 aa13.46□□□□□ -0.26
LEMD3-201ENST00000308330 IHHQ14623 411 aa13.46□□□□□ -0.26
LEMD3-201ENST00000308330 AADACL3Q5VUY0 350 aa13.46□□□□□ -0.26
LEMD3-201ENST00000308330 OR10G8Q8NGN5 311 aa13.46□□□□□ -0.26
LEMD3-201ENST00000308330 OR52E5Q8NH55 327 aa13.46□□□□□ -0.26
LEMD3-201ENST00000308330 SPACA9Q96E40 222 aaPredicted RBP13.46□□□□□ -0.26
LEMD3-201ENST00000308330 ZNF71Q9NQZ8 489 aaPredicted RBP13.46□□□□□ -0.26
LEMD3-201ENST00000308330 FBXO34Q9NWN3 711 aa13.46□□□□□ -0.26
LEMD3-201ENST00000308330 PNLIPP16233 465 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 HIST1H1DP16402 221 aaKnown RBP13.45□□□□□ -0.26
LEMD3-201ENST00000308330 TMEM177Q53S58 311 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 Q96M85 177 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 OCIAD1Q9NX40 245 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 MTCH1Q9NZJ7 389 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 CYSLTR1Q9Y271 337 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 MYOFQ9NZM1 2061 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 EML2O95834 649 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 IER3P46695 156 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 TMEM95Q3KNT9 176 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 OR5A1Q8NGJ0 315 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 OR5C1Q8NGR4 320 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 NRTNQ99748 197 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 MAGT1Q9H0U3 335 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 FNDC4Q9H6D8 234 aaPredicted RBP13.45□□□□□ -0.26
LEMD3-201ENST00000308330 SPTBN1Q01082 2364 aaKnown RBP13.45□□□□□ -0.26
LEMD3-201ENST00000308330 LIMS1P48059 325 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 MRAP2Q96G30 205 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 H3BVH4 76 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 CORTO00230 105 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 DEDDO75618 318 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 CTAG2O75638 210 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 FCGR2AP12318 317 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 FKBP2P26885 142 aaKnown RBP13.45□□□□□ -0.26
LEMD3-201ENST00000308330 P2RY1P47900 373 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 IL13RA2Q14627 380 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 WDFY1Q8IWB7 410 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 PRR18Q8N4B5 295 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 OR10S1Q8NGN2 331 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 RARRES2Q99969 163 aa13.45□□□□□ -0.26
LEMD3-201ENST00000308330 ARPC3O15145 178 aa13.44□□□□□ -0.26
LEMD3-201ENST00000308330 SLC37A1P57057 533 aa13.44□□□□□ -0.26
LEMD3-201ENST00000308330 FAM57BQ71RH2 274 aa13.44□□□□□ -0.26
LEMD3-201ENST00000308330 SLC17A5Q9NRA2 495 aa13.44□□□□□ -0.26
LEMD3-201ENST00000308330 ARFGEF1Q9Y6D6 1849 aa13.44□□□□□ -0.26
LEMD3-201ENST00000308330 ERGP11308 486 aa13.44□□□□□ -0.26
LEMD3-201ENST00000308330 PMP22Q01453 160 aa13.44□□□□□ -0.26
LEMD3-201ENST00000308330 ASB10Q8WXI3 467 aa13.44□□□□□ -0.26
LEMD3-201ENST00000308330 TRIB1Q96RU8 372 aa13.44□□□□□ -0.26
LEMD3-201ENST00000308330 WNT10AQ9GZT5 417 aa13.44□□□□□ -0.26
LEMD3-201ENST00000308330 C1QL1O75973 258 aa13.44□□□□□ -0.26
LEMD3-201ENST00000308330 FTH1P19P0C7X4 201 aa13.44□□□□□ -0.26
LEMD3-201ENST00000308330 TDGF1P13385 188 aa13.44□□□□□ -0.26
LEMD3-201ENST00000308330 DUSP2Q05923 314 aa13.44□□□□□ -0.26
LEMD3-201ENST00000308330 PRICKLE4Q2TBC4 344 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms