RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ZNF664Q8N3J9 261 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 ZNF611Q8N823 705 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 TBX15Q96SF7 602 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 TXN2Q99757 166 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 C2orf88Q9BSF0 95 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 ANGPTL4Q9BY76 406 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 ARV1Q9H2C2 271 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 SRD5A3Q9H8P0 318 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 COL4A6Q14031 1691 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 LINC01565O15544 149 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 FUT6P51993 359 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 AAED1Q7RTV5 226 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 ALKBH3Q96Q83 286 aaPredicted RBP11.3□□□□□ -0.6
TRIM35-201ENST00000305364 FAM103A1Q9BTL3 118 aaKnown RBP11.3□□□□□ -0.6
TRIM35-201ENST00000305364 MYOTQ9UBF9 498 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 CLEC18AA5D8T8 446 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 RPLP1P05386 114 aaKnown RBP11.3□□□□□ -0.6
TRIM35-201ENST00000305364 OTX2P32243 289 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 SLC25A47Q6Q0C1 308 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 CLEC18CQ8NCF0 446 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 MSI2Q96DH6 328 aaKnown RBP11.3□□□□□ -0.6
TRIM35-201ENST00000305364 ADGRG7Q96K78 797 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 C1orf147Q96MC9 270 aaPredicted RBP11.3□□□□□ -0.6
TRIM35-201ENST00000305364 ESPL1Q14674 2120 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 C5orf63A6NC05 138 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 IFITM10A6NMD0 228 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 SPINK2P20155 84 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 FASLGP48023 281 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 FAM3BP58499 235 aaPredicted RBP11.3□□□□□ -0.6
TRIM35-201ENST00000305364 PPP1CBP62140 327 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 OR5I1Q13606 314 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 OR8G5Q8NG78 346 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 MRPL30Q8TCC3 161 aaKnown RBP11.3□□□□□ -0.6
TRIM35-201ENST00000305364 TM2D1Q9BX74 207 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 RBKSQ9H477 322 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 ERRFI1Q9UJM3 462 aaPredicted RBP11.3□□□□□ -0.6
TRIM35-201ENST00000305364 PAM16Q9Y3D7 125 aa11.3□□□□□ -0.6
TRIM35-201ENST00000305364 TRAF3IP2O43734 574 aaPredicted RBP11.29□□□□□ -0.6
TRIM35-201ENST00000305364 CTXN2P0C2S0 81 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 NUTF2P61970 127 aaKnown RBP11.29□□□□□ -0.6
TRIM35-201ENST00000305364 ADPRHL1Q8NDY3 354 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 OR1K1Q8NGR3 316 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 C18orf12Q96KH6 178 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 TMEM68Q96MH6 324 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 VAMP8Q9BV40 100 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 MSL2Q9HCI7 577 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 DCAF16Q9NXF7 216 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 CLDN16Q9Y5I7 305 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 A0A0U1RQV5 110 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 A0A1B0GU03 582 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 SYNGR2O43760 224 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 CA11O75493 328 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 CLPSP04118 112 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 HTD2P86397 168 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 TNFRSF9Q07011 255 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 SNAI3Q3KNW1 292 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 SPSB3Q6PJ21 355 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 LILRA5A6NI73 299 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 KITLGP21583 273 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 CNN1P51911 297 aaKnown RBP11.29□□□□□ -0.6
TRIM35-201ENST00000305364 RTP5Q14D33 572 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 SELENOHQ8IZQ5 122 aaKnown RBP11.29□□□□□ -0.6
TRIM35-201ENST00000305364 DEFB123Q8N688 67 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 TMEM171Q8WVE6 324 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 BTF3L4Q96K17 158 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 ACTR3CQ9C0K3 210 aaPredicted RBP11.29□□□□□ -0.6
TRIM35-201ENST00000305364 SDF2L1Q9HCN8 221 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 GLRX2Q9NS18 164 aa11.29□□□□□ -0.6
TRIM35-201ENST00000305364 CISD1Q9NZ45 108 aaKnown RBP11.29□□□□□ -0.6
TRIM35-201ENST00000305364 P04436 131 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 P2RY6Q15077 328 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 DPPA3Q6W0C5 159 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 OR1F12Q8NHA8 337 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 B4GALT7Q9UBV7 327 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 TRAPPC2LQ9UL33 140 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 A0A1B0GW64 132 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 ZNF732B4DXR9 585 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 GZMBP10144 247 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 SRFP11831 508 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 SLC38A11Q08AI6 406 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 OR2V1Q8NHB1 315 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 VWCEQ96DN2 955 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 ZNF385AQ96PM9 386 aaKnown RBP11.28□□□□□ -0.6
TRIM35-201ENST00000305364 PROB1E7EW31 1015 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 OR10J1P30954 320 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 KRTDAPP60985 99 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 MEF2BQ02080 365 aaPredicted RBP11.28□□□□□ -0.6
TRIM35-201ENST00000305364 ZNF90Q03938 601 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 HERPUD1Q15011 391 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 NINJ1Q92982 152 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 ELOVL1Q9BW60 279 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 MRPL37Q9BZE1 423 aaKnown RBP11.28□□□□□ -0.6
TRIM35-201ENST00000305364 CACNA1DQ01668 2161 aa11.28□□□□□ -0.6
TRIM35-201ENST00000305364 A0A1W2PPC4 97 aa11.27□□□□□ -0.6
TRIM35-201ENST00000305364 EREGO14944 169 aa11.27□□□□□ -0.6
TRIM35-201ENST00000305364 VAMP5O95183 116 aa11.27□□□□□ -0.6
TRIM35-201ENST00000305364 SCTP09683 121 aa11.27□□□□□ -0.6
TRIM35-201ENST00000305364 ZNF32P17041 273 aa11.27□□□□□ -0.6
TRIM35-201ENST00000305364 ZNF581Q9P0T4 197 aa11.27□□□□□ -0.6
TRIM35-201ENST00000305364 NAGKQ9UJ70 344 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms