RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 RFESDQ8TAC1 157 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 PRRX2Q99811 253 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 RSRP1Q9BUV0 290 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 SCNM1Q9BWG6 230 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 COL25A1Q9BXS0 654 aaPredicted RBP12.33□□□□□ -0.44
SMG8-201ENST00000300917 BCL2L14Q9BZR8 327 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 FBXL17Q9UF56 701 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 TP53TG5Q9Y2B4 290 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 POLDIP2Q9Y2S7 368 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 IGHV3-13P01766 116 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 IGHV3-7P01780 117 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 ID4P47928 161 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 SPRNQ5BIV9 151 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 OR2B11Q5JQS5 317 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 PCSK4Q6UW60 755 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 PKIBQ9C010 78 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 PLK3Q9H4B4 646 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 SPACA1Q9HBV2 294 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 PCDHB10Q9UN67 800 aa12.33□□□□□ -0.44
SMG8-201ENST00000300917 COL6A6A6NMZ7 2263 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 FAM90A10PA6NDY2 464 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 FAM90A18PA6NE21 464 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 FAM90A16PA6NEW6 464 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 FAM90A20PA6NIJ5 464 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 FAM90A8PA6NJQ4 464 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 FAM90A7PA6NKC0 464 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 OR5H1A6NKK0 313 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 FAM90A22PA8MWA6 464 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 FAM90A12PA8MX19 464 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 FAM90A5PA8MXJ8 464 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 FAM90A23PA8MXZ1 464 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 IQCF6A8MYZ5 107 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 APOC3P02656 99 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 FAM90A15PP0C7V4 464 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 FAM90A13PP0C7W8 464 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 FAM90A14PP0C7W9 464 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 FAM90A24PP0C7X0 464 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 PET100P0DJ07 73 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 TMEM33P57088 247 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 POLR2GP62487 172 aaKnown RBP eCLIP12.32□□□□□ -0.44
SMG8-201ENST00000300917 EDDM3AQ14507 147 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 OR8G5Q8NG78 346 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 USB1Q9BQ65 265 aaKnown RBP12.32□□□□□ -0.44
SMG8-201ENST00000300917 TRBV6-7A0A0A0MS04 114 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 A0A1B0GV50 99 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 ADAM20O43506 726 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 SNAPC5O75971 98 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 HAND1O96004 215 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 NHLH2Q02577 135 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 RNASE11Q8TAA1 199 aaKnown RBP12.32□□□□□ -0.44
SMG8-201ENST00000300917 NRIP2Q9BQI9 281 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 DCTN5Q9BTE1 182 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 SUCNR1Q9BXA5 334 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 HRH4Q9H3N8 390 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 TAF9BQ9HBM6 251 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 RCL1Q9Y2P8 373 aaKnown RBP12.32□□□□□ -0.44
SMG8-201ENST00000300917 SESN1Q9Y6P5 492 aa12.32□□□□□ -0.44
SMG8-201ENST00000300917 IGHV3OR15-7A0A075B7D8 119 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 IGHV3-43A0A0B4J1X8 118 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 GPR31O00270 319 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 DEDDO75618 318 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 CGAP01215 116 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 PGA5P0DJD9 388 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 IGHV3-43DP0DP04 118 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 GABRA2P47869 451 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 CAV2P51636 162 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 HLA-DRB3P79483 266 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 ZNF718Q3SXZ3 478 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 PRR30Q53SZ7 412 aaPredicted RBP12.31□□□□□ -0.44
SMG8-201ENST00000300917 CXorf66Q5JRM2 361 aaPredicted RBP12.31□□□□□ -0.44
SMG8-201ENST00000300917 FAM201AQ5SY85 155 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 GALNT14Q96FL9 552 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 ZNF705EA8MWA4 302 aaPredicted RBP12.31□□□□□ -0.44
SMG8-201ENST00000300917 SH2D1BO14796 132 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 PMELP40967 661 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 RFNGQ9Y644 331 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 DEFB108AA8MXU0 73 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 SPRY3O43610 288 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 TUSC2O75896 110 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 PTBP3O95758 552 aaKnown RBP12.31□□□□□ -0.44
SMG8-201ENST00000300917 NUBP1P53384 320 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 IGF2-ASQ6U949 168 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 CCDC36Q8IYA8 594 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 MRGPRDQ8TDS7 321 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 C18orf12Q96KH6 178 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 SHARPINQ9H0F6 387 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 SLC25A32Q9H2D1 315 aa12.31□□□□□ -0.44
SMG8-201ENST00000300917 H3BP45 60 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 MKRN2OSH3BPM6 223 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 SSSCA1O60232 199 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 CEACAM6P40199 344 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 OR3A1P47881 315 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 CLINT1Q14677 625 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 FAM180AQ6UWF9 173 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 CMTM1Q8IZ96 169 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 ZNF808Q8N4W9 903 aaPredicted RBP12.3□□□□□ -0.44
SMG8-201ENST00000300917 LINC00469Q8N7U9 141 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 BVESQ8NE79 360 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 OR1L1Q8NH94 360 aa12.3□□□□□ -0.44
SMG8-201ENST00000300917 AQP10Q96PS8 301 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms