RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 PTPRFP10586 1907 aa12.42□□□□□ -0.42
COL1A2-201ENST00000297268 FOXS1O43638 330 aa12.42□□□□□ -0.42
COL1A2-201ENST00000297268 NDUFB3O43676 98 aa12.42□□□□□ -0.42
COL1A2-201ENST00000297268 ZP1P60852 638 aa12.42□□□□□ -0.42
COL1A2-201ENST00000297268 TMEM97Q5BJF2 176 aa12.42□□□□□ -0.42
COL1A2-201ENST00000297268 IL36GQ9NZH8 169 aa12.42□□□□□ -0.42
COL1A2-201ENST00000297268 OR4S2Q8NH73 311 aa12.42□□□□□ -0.42
COL1A2-201ENST00000297268 RAB24Q969Q5 203 aa12.42□□□□□ -0.42
COL1A2-201ENST00000297268 SRSF10O75494 262 aaKnown RBP12.41□□□□□ -0.42
COL1A2-201ENST00000297268 ERGP11308 486 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 ZXDCQ2QGD7 858 aaPredicted RBP12.41□□□□□ -0.42
COL1A2-201ENST00000297268 LRRC10Q5BKY1 277 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 TRBV23-1A0A0A0MS06 115 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 TRAV39A0A0B4J263 110 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 OOEPA6NGQ2 149 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 DXOO77932 396 aaKnown RBP12.41□□□□□ -0.42
COL1A2-201ENST00000297268 FAM157CP0CG43 387 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 Q1RN00 199 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 TMEM252Q8N6L7 170 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 ZNF552Q9H707 407 aaPredicted RBP12.41□□□□□ -0.42
COL1A2-201ENST00000297268 ACTL6AO96019 429 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 ORM2P19652 201 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 UCN2Q96RP3 112 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 KIAA0100Q14667 2235 aaKnown RBP12.41□□□□□ -0.42
COL1A2-201ENST00000297268 LMX1BO60663 402 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 IL11P20809 199 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 FCARP24071 287 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 ID4P47928 161 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 MEOX1P50221 254 aa12.41□□□□□ -0.42
COL1A2-201ENST00000297268 A0A0B4J293 547 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 SEMA7AO75326 666 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 LYZL6O75951 148 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 HSPB1P04792 205 aaKnown RBP12.4□□□□□ -0.42
COL1A2-201ENST00000297268 EIF3IQ13347 325 aaKnown RBP12.4□□□□□ -0.42
COL1A2-201ENST00000297268 C1orf100Q5SVJ3 147 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 OR4A4PQ8NGN8 299 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 ZNF721Q8TF20 911 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 MAP1BP46821 2468 aaKnown RBP12.4□□□□□ -0.42
COL1A2-201ENST00000297268 PAPPA2Q9BXP8 1791 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 TGIF2-C20orf24A0A0A6YYL0 155 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 IGHV1OR15-9A0A0B4J2B8 117 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 TCF21O43680 179 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 NGFRP08138 427 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 TNFRSF1AP19438 455 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 NXPH1P58417 271 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 ROM1Q03395 351 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 CXXC4Q9H2H0 198 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 COL5A3P25940 1745 aaPredicted RBP12.4□□□□□ -0.42
COL1A2-201ENST00000297268 HELTA6NFD8 242 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 ZNF785A8K8V0 405 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 HAND1O96004 215 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 SCGB1C2P0DMR2 95 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 ZNF519Q8TB69 540 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 H0YL77 283 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 CDIPTO14735 213 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 PDPNQ86YL7 162 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 RNF2Q99496 336 aa12.4□□□□□ -0.42
COL1A2-201ENST00000297268 FAM87AP0C7U9 286 aa12.4□□□□□ -0.43
COL1A2-201ENST00000297268 ZNF83P51522 516 aa12.4□□□□□ -0.43
COL1A2-201ENST00000297268 RBM11P57052 281 aaKnown RBP12.4□□□□□ -0.43
COL1A2-201ENST00000297268 OR2M7Q8NG81 312 aa12.4□□□□□ -0.43
COL1A2-201ENST00000297268 SGMS2Q8NHU3 365 aa12.4□□□□□ -0.43
COL1A2-201ENST00000297268 HIST1H2BAQ96A08 127 aa12.4□□□□□ -0.43
COL1A2-201ENST00000297268 RSG1Q9BU20 258 aa12.4□□□□□ -0.43
COL1A2-201ENST00000297268 KCNE5Q9UJ90 142 aa12.4□□□□□ -0.43
COL1A2-201ENST00000297268 DIRC3C9JPN6 131 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 CXorf1O96002 111 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 PPOXP50336 477 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 SERF2P84101 59 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 ZP4Q12836 540 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 TM4SF19Q96DZ7 209 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 TMEM38BQ9NVV0 291 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 A0A1W2PN81 502 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 C3orf80F5H4A9 247 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 DDTP30046 118 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 C19orf48Q6RUI8 117 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 SLC36A1Q7Z2H8 476 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 TRA2AQ13595 282 aaKnown RBP eCLIP12.39□□□□□ -0.43
COL1A2-201ENST00000297268 DEFB109BQ30KR1 87 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 ZNF766Q5HY98 468 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 SLC23A3Q6PIS1 610 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 RARRES2Q99969 163 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 ABHD14AQ9BUJ0 271 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 MAP1LC3CQ9BXW4 147 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 POU2F2P09086 479 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 DHRS11Q6UWP2 260 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 UBR3Q6ZT12 1888 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 OR2M3Q8NG83 312 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 OR1B1Q8NGR6 318 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 CLN8Q9UBY8 286 aa12.39□□□□□ -0.43
COL1A2-201ENST00000297268 SPAG17Q6Q759 2223 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 C4orf51C9J302 202 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 APCSP02743 223 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 CD99P14209 185 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 S100A4P26447 101 aaKnown RBP12.38□□□□□ -0.43
COL1A2-201ENST00000297268 MRPS11P82912 194 aaKnown RBP12.38□□□□□ -0.43
COL1A2-201ENST00000297268 GAMTQ14353 236 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 C5orf66Q9H5L9 145 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 GPR35Q9HC97 309 aa12.38□□□□□ -0.43
COL1A2-201ENST00000297268 OR6C3Q9NZP0 311 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms