RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 MKRN2OSH3BPM6 223 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 KLK13Q9UKR3 277 aa14.18□□□□□ -0.14
SSRP1-202ENST00000293880 ZNF324O75467 553 aaPredicted RBP14.17□□□□□ -0.14
SSRP1-202ENST00000293880 PEX11BO96011 259 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 HIKESHIQ53FT3 197 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 MYOZ3Q8TDC0 251 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 COL9A1P20849 921 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 TMEM50BP56557 158 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 IL24Q13007 206 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 AMMECR1Q9Y4X0 333 aaPredicted RBP14.17□□□□□ -0.14
SSRP1-202ENST00000293880 EIF3GO75821 320 aaKnown RBP eCLIP14.17□□□□□ -0.14
SSRP1-202ENST00000293880 MGAT2Q10469 447 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 ECSCRQ19T08 205 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 RND1Q92730 232 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 hADV38S2A0JD32 116 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 TMEM210A6NLX4 147 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 HMSDA8MTL9 139 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 SOX8P57073 446 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 KIAA0040Q15053 153 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 OR13G1Q8NGZ3 307 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 HMGCLL1Q8TB92 370 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 RPS4Y2Q8TD47 263 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 FAM222BQ8WU58 562 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 ZNF488Q96MN9 340 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 SYNGR2O43760 224 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 TGFAP01135 160 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 MAGEA5P43359 124 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 NSUN5P2Q63ZY6 315 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 GRAMD2BQ96HH9 432 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 CACFD1Q9UGQ2 172 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 TJP1Q07157 1748 aa14.17□□□□□ -0.14
SSRP1-202ENST00000293880 IGKV3D-15A0A087WSY6 115 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 A0A1B0GV72 72 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 LMX1BO60663 402 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 IGKV3-15P01624 115 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 MRPS11P82912 194 aaKnown RBP14.16□□□□□ -0.14
SSRP1-202ENST00000293880 ZNF418Q8TF45 676 aaPredicted RBP14.16□□□□□ -0.14
SSRP1-202ENST00000293880 RCC2Q9P258 522 aaKnown RBP14.16□□□□□ -0.14
SSRP1-202ENST00000293880 CDIPTO14735 213 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 TRGC2P03986 189 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 CTSDP07339 412 aaPredicted RBP14.16□□□□□ -0.14
SSRP1-202ENST00000293880 CDK5RAP2Q96SN8 1893 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 MBPP02686 304 aaPredicted RBP14.16□□□□□ -0.14
SSRP1-202ENST00000293880 DDTP30046 118 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 CD226Q15762 336 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 ZNF770Q6IQ21 691 aaPredicted RBP14.16□□□□□ -0.14
SSRP1-202ENST00000293880 FAHD2BQ6P2I3 314 aaPredicted RBP14.16□□□□□ -0.14
SSRP1-202ENST00000293880 RFLNBQ8N5W9 214 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 OR1L1Q8NH94 360 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 GMPPAQ96IJ6 420 aaPredicted RBP14.16□□□□□ -0.14
SSRP1-202ENST00000293880 VSTM2LQ96N03 204 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 GPR3P46089 330 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 LGALS7P47929 136 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 IP6K3Q96PC2 410 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 ZPBPQ9BS86 351 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 VAX2Q9UIW0 290 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 GP1BAP07359 652 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 BTF3P20290 206 aaKnown RBP14.16□□□□□ -0.14
SSRP1-202ENST00000293880 MPLP40238 635 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 C10orf126Q8N4M7 172 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 FAM216AQ8WUB2 273 aa14.16□□□□□ -0.14
SSRP1-202ENST00000293880 GNG7O60262 68 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 GUCA2BQ16661 112 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 ZNF506Q5JVG8 444 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 RASL11BQ9BPW5 248 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 IL36RNQ9UBH0 155 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 GCGP01275 180 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 C1QCP02747 245 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 KHDC3LQ587J8 217 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 ZNF343Q6P1L6 599 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 OIT3Q8WWZ8 545 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 RAB24Q969Q5 203 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 GLRX2Q9NS18 164 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 OR4C45A6NMZ5 311 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 FFAR1O14842 300 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 FOXL2P58012 376 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 TFF2Q03403 129 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 RNF133Q8WVZ7 376 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 ALG14Q96F25 216 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 TMEM167BQ9NRX6 74 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 ANXA10Q9UJ72 324 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 KCNK7Q9Y2U2 307 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 IGSF23A1L1A6 192 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 CTGFP29279 349 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 CD81P60033 236 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 RIGQ13278 110 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 ACER2Q5QJU3 275 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 PWWP2BQ6NUJ5 590 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 JMJD6Q6NYC1 403 aaPredicted RBP14.15□□□□□ -0.14
SSRP1-202ENST00000293880 OR4S2Q8NH73 311 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 DDA1Q9BW61 102 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 ANGPTL4Q9BY76 406 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 RBM38Q9H0Z9 239 aaKnown RBP14.15□□□□□ -0.14
SSRP1-202ENST00000293880 LINC00469Q8N7U9 141 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 LHFPL5Q8TAF8 219 aa14.15□□□□□ -0.14
SSRP1-202ENST00000293880 MYH14Q7Z406 1995 aaKnown RBP14.15□□□□□ -0.14
SSRP1-202ENST00000293880 K7EQS6 105 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 SMPD2O60906 423 aa14.14□□□□□ -0.15
SSRP1-202ENST00000293880 KLF7O75840 302 aaPredicted RBP14.14□□□□□ -0.15
SSRP1-202ENST00000293880 DMKNQ6E0U4 476 aaPredicted RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms