RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 TMEM222Q9H0R3 208 aa16.15■□□□□ 0.18
SHF-201ENST00000290894 TMEM100Q9NV29 134 aa16.15■□□□□ 0.18
SHF-201ENST00000290894 DNAJB11Q9UBS4 358 aa16.15■□□□□ 0.18
SHF-201ENST00000290894 PURGQ9UJV8 347 aaKnown RBP16.15■□□□□ 0.18
SHF-201ENST00000290894 POLDIP2Q9Y2S7 368 aa16.15■□□□□ 0.18
SHF-201ENST00000290894 GPR31O00270 319 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 PGA5P0DJD9 388 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 NBL1P41271 181 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 ASCL1P50553 236 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 ERVK11-1P61568 191 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 Q6ZR03 302 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 LINC00596Q86U02 117 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 EIF4E3Q8N5X7 224 aaKnown RBP16.14■□□□□ 0.17
SHF-201ENST00000290894 OR51H1Q8NH63 302 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 TRAPPC2LQ9UL33 140 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 TLN1Q9Y490 2541 aaKnown RBP16.14■□□□□ 0.17
SHF-201ENST00000290894 IGHV1-18A0A0C4DH31 117 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 J3QW42 95 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 TSPAN4O14817 238 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 TUSC2O75896 110 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 CNOT4O95628 575 aaKnown RBP16.14■□□□□ 0.17
SHF-201ENST00000290894 CGAP01215 116 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 RBMXL3Q8N7X1 1067 aaKnown RBP16.14■□□□□ 0.17
SHF-201ENST00000290894 LRTM2Q8N967 370 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 PARP12Q9H0J9 701 aaKnown RBP16.14■□□□□ 0.17
SHF-201ENST00000290894 ESRP2Q9H6T0 727 aaKnown RBP16.14■□□□□ 0.17
SHF-201ENST00000290894 AMDHD2Q9Y303 409 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 FAM215AQ9Y5M1 114 aa16.14■□□□□ 0.17
SHF-201ENST00000290894 A0A1B0GW55 424 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 DUX4L2P0CJ85 424 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 DUX4L3P0CJ86 424 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 DUX4L4P0CJ87 422 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 DUX4L5P0CJ88 424 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 DUX4L6P0CJ89 424 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 DUX4L7P0CJ90 424 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 HLA-DRB3P79483 266 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 BHLHA15Q7RTS1 189 aaPredicted RBP16.13■□□□□ 0.17
SHF-201ENST00000290894 ZNF695Q8IW36 515 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 SNIP1Q8TAD8 396 aaKnown RBP16.13■□□□□ 0.17
SHF-201ENST00000290894 TAF9BQ9HBM6 251 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 DUX4Q9UBX2 424 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 IGHV2OR16-5A0A0B4J2B6 119 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 PSPNO60542 156 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 ZNF83P51522 516 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 FAM53AQ6NSI3 398 aaPredicted RBP16.13■□□□□ 0.17
SHF-201ENST00000290894 OR8G5Q8NG78 346 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 LRFN3Q9BTN0 628 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 MAGT1Q9H0U3 335 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 ZDHHC8Q9ULC8 765 aa16.13■□□□□ 0.17
SHF-201ENST00000290894 TAGLNQ01995 201 aaKnown RBP16.12■□□□□ 0.17
SHF-201ENST00000290894 Q6ZS92 163 aa16.12■□□□□ 0.17
SHF-201ENST00000290894 ASCL5Q7RTU5 278 aa16.12■□□□□ 0.17
SHF-201ENST00000290894 GTF3AQ92664 365 aaKnown RBP16.12■□□□□ 0.17
SHF-201ENST00000290894 USF3Q68DE3 2245 aa16.12■□□□□ 0.17
SHF-201ENST00000290894 ZNF705EA8MWA4 302 aaPredicted RBP16.12■□□□□ 0.17
SHF-201ENST00000290894 PROB1E7EW31 1015 aa16.12■□□□□ 0.17
SHF-201ENST00000290894 HSPA12AO43301 675 aa16.12■□□□□ 0.17
SHF-201ENST00000290894 NAAAQ02083 359 aa16.12■□□□□ 0.17
SHF-201ENST00000290894 SRSF7Q16629 238 aaKnown RBP eCLIP16.12■□□□□ 0.178e-8■□□□□ 9.8
SHF-201ENST00000290894 ZNF324BQ6AW86 544 aaPredicted RBP16.12■□□□□ 0.17
SHF-201ENST00000290894 IGFL3Q6UXB1 125 aa16.12■□□□□ 0.17
SHF-201ENST00000290894 C11orf53Q8IXP5 236 aa16.12■□□□□ 0.17
SHF-201ENST00000290894 RIMS4Q9H426 269 aaPredicted RBP16.12■□□□□ 0.17
SHF-201ENST00000290894 DUSP13Q9UII6 198 aa16.12■□□□□ 0.17
SHF-201ENST00000290894 ADAM20O43506 726 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 APOC3P02656 99 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 ZNF474Q6S9Z5 364 aaPredicted RBP16.11■□□□□ 0.17
SHF-201ENST00000290894 C1orf162Q8NEQ5 155 aaPredicted RBP16.11■□□□□ 0.17
SHF-201ENST00000290894 RCL1Q9Y2P8 373 aaKnown RBP16.11■□□□□ 0.17
SHF-201ENST00000290894 OR2W1Q9Y3N9 320 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 SPTA1P02549 2419 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 MBD3L4A6NDZ8 208 aaPredicted RBP16.11■□□□□ 0.17
SHF-201ENST00000290894 MBD3L3A6NE82 208 aaPredicted RBP16.11■□□□□ 0.17
SHF-201ENST00000290894 MBD3L5A6NJ08 208 aaPredicted RBP16.11■□□□□ 0.17
SHF-201ENST00000290894 OR5H1A6NKK0 313 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 PGLYRP1O75594 196 aaPredicted RBP16.11■□□□□ 0.17
SHF-201ENST00000290894 HAND1O96004 215 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 GLAP06280 429 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 FAM157CP0CG43 387 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 NHLH2Q02577 135 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 MSMPQ1L6U9 139 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 IZUMO4Q1ZYL8 232 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 ZNF497Q6ZNH5 498 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 LRP11Q86VZ4 500 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 CMTM1Q8IZ96 169 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 SELENOHQ8IZQ5 122 aaKnown RBP16.11■□□□□ 0.17
SHF-201ENST00000290894 OR4A4PQ8NGN8 299 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 MBD3L2Q8NHZ7 208 aaPredicted RBP16.11■□□□□ 0.17
SHF-201ENST00000290894 S100PBPQ96BU1 408 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 TMED3Q9Y3Q3 217 aa16.11■□□□□ 0.17
SHF-201ENST00000290894 IGF2RP11717 2491 aa16.1■□□□□ 0.17
SHF-201ENST00000290894 SH2D1BO14796 132 aa16.1■□□□□ 0.17
SHF-201ENST00000290894 CTXN2P0C2S0 81 aa16.1■□□□□ 0.17
SHF-201ENST00000290894 VHLLQ6RSH7 139 aa16.1■□□□□ 0.17
SHF-201ENST00000290894 Q8IYB0 196 aa16.1■□□□□ 0.17
SHF-201ENST00000290894 TPRX1Q8N7U7 411 aa16.1■□□□□ 0.17
SHF-201ENST00000290894 BPIFCQ8NFQ6 507 aa16.1■□□□□ 0.17
SHF-201ENST00000290894 RNF141Q8WVD5 230 aa16.1■□□□□ 0.17
SHF-201ENST00000290894 DNTTIP1Q9H147 329 aa16.1■□□□□ 0.17
SHF-201ENST00000290894 RBM7Q9Y580 266 aaKnown RBP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms