RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 ERVS71-1P61550 626 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 RRAS2P62070 204 aaPredicted RBP7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 UBE2V2Q15819 145 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 ACOT7LQ6ZUV0 252 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 H2BFWTQ7Z2G1 175 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 LILRB1Q8NHL6 650 aaPredicted RBP7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 ERGIC1Q969X5 290 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 NUDT16L1Q9BRJ7 211 aaKnown RBP7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 MS4A5Q9H3V2 200 aa7.17□□□□□ -1.26
PTPDC1-201ENST00000288976 IGKV1-9A0A0C4DH69 117 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 C19orf84I3L1E1 186 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 I3L521 148 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 IFNL4K9M1U5 179 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 DNASE2O00115 360 aaPredicted RBP7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 GPR37O15354 613 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 OR2F2O95006 317 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 CRYZL1O95825 349 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 HLA-AP01891 365 aaKnown RBP7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 CDK2P24941 298 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 MPZP25189 248 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 GATA4P43694 442 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 MMP15P51511 669 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 ZP1P60852 638 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 TESK1Q15569 626 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 ADIPOQQ15848 244 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 FAM27D1Q5T7N8 215 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 S100A7AQ86SG5 101 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 WFDC3Q8IUB2 231 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 SLC25A28Q96A46 364 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 TAS2R3Q9NYW6 316 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 ST3GAL6Q9Y274 331 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 ZFP92A6NM28 416 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 TXNL1O43396 289 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 OR10J4P0C629 311 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 TGFBR1P36897 503 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 C11orf44Q8N8P7 122 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 PXT1Q8NFP0 134 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 OR5M8Q8NGP6 311 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 MRPL37Q9BZE1 423 aaKnown RBP7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 HES4Q9HCC6 221 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 C1orf123Q9NWV4 160 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 TRBV23-1A0A0A0MS06 115 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 OR4A8P0C604 315 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 NAT2P11245 290 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 PTBP1P26599 531 aaKnown RBP eCLIP7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 RPP30P78346 268 aaKnown RBP7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 BAXQ07812 192 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 TMEM255AQ5JRV8 349 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 UBE2NLQ5JXB2 153 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 RBMXL1Q96E39 390 aaKnown RBP7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 ACY3Q96HD9 319 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 MALRD1Q5VYJ5 2156 aa7.16□□□□□ -1.26
PTPDC1-201ENST00000288976 E7EQL1 145 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 PMP2P02689 132 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 ETV6P41212 452 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 GNG3P63215 75 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 ZNF626Q68DY1 528 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 CRIP3Q6Q6R5 217 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 LINC00596Q86U02 117 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 MOGAT3Q86VF5 341 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 NR2C2APQ86WQ0 139 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 C12orf45Q8N5I9 185 aaPredicted RBP7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 OR10Z1Q8NGY1 313 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 RBM14Q96PK6 669 aaKnown RBP7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 SPACA1Q9HBV2 294 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 YAE1D1Q9NRH1 226 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 OR5V1Q9UGF6 321 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 POMT1Q9Y6A1 747 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 J3KRW8 73 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 M0R1X1 148 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 MAGEB1P43366 347 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 IL24Q13007 206 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 KISS1Q15726 138 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 DTX2Q86UW9 622 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 Q8NFD4 153 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 Q8TCH9 128 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 SNAPC3Q92966 411 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 SEBOXQ9HB31 216 aaPredicted RBP7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 IL19Q9UHD0 177 aa7.15□□□□□ -1.26
PTPDC1-201ENST00000288976 LOC100289279A0A1B0GTE1 492 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 HPGDSO60760 199 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 IFNA1P01562 189 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 MT-ND4P03905 459 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 CLEC2LP0C7M8 214 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 DTYMKP23919 212 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 Q8IYB0 196 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 HSD17B11Q8NBQ5 300 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 OR52N4Q8NGI2 321 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 OR51A2Q8NGJ7 313 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 LGALS14Q8TCE9 139 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 PRR14LQ5THK1 2151 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 TANC2Q9HCD6 1990 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 A0A0B4J203 849 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 TMEM235A6NFC5 223 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 RNF212BA8MTL3 300 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 CTDSP2O14595 271 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 LDLRAD4O15165 306 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 GPR137BO60478 399 aa7.15□□□□□ -1.27
PTPDC1-201ENST00000288976 SPDEFO95238 335 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms