RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 FBXO9Q9UK97 447 aaPredicted RBP16.31■□□□□ 0.2
BRAF-201ENST00000288602 TRAPPC2LQ9UL33 140 aa16.31■□□□□ 0.2
BRAF-201ENST00000288602 PCDHB10Q9UN67 800 aa16.31■□□□□ 0.2
BRAF-201ENST00000288602 A6NLC8 198 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 TSPAN9O75954 239 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 ZP3P21754 424 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 ZNF880Q6PDB4 577 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 ZNF474Q6S9Z5 364 aaPredicted RBP16.3■□□□□ 0.2
BRAF-201ENST00000288602 HSD17B13Q7Z5P4 300 aaPredicted RBP16.3■□□□□ 0.2
BRAF-201ENST00000288602 GTF3AQ92664 365 aaKnown RBP16.3■□□□□ 0.2
BRAF-201ENST00000288602 ERGIC1Q969X5 290 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 IFT22Q9H7X7 185 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 OR5H1A6NKK0 313 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 PSPNO60542 156 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 ZNF83P51522 516 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 TMEM33P57088 247 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 NAAAQ02083 359 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 ZNF324BQ6AW86 544 aaPredicted RBP16.3■□□□□ 0.2
BRAF-201ENST00000288602 ZNF695Q8IW36 515 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 Q8IYB0 196 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 OR4A4PQ8NGN8 299 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 FBXL17Q9UF56 701 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 AMDHD2Q9Y303 409 aa16.3■□□□□ 0.2
BRAF-201ENST00000288602 TRBV6-6A0A0A6YYG2 114 aa16.29■□□□□ 0.2
BRAF-201ENST00000288602 NXPH3O95157 252 aa16.29■□□□□ 0.2
BRAF-201ENST00000288602 IGLV1-44P01699 117 aa16.29■□□□□ 0.2
BRAF-201ENST00000288602 CTXN2P0C2S0 81 aa16.29■□□□□ 0.2
BRAF-201ENST00000288602 ZNF497Q6ZNH5 498 aa16.29■□□□□ 0.2
BRAF-201ENST00000288602 MS4A7Q9GZW8 240 aaPredicted RBP16.29■□□□□ 0.2
BRAF-201ENST00000288602 ZDHHC8Q9ULC8 765 aa16.29■□□□□ 0.2
BRAF-201ENST00000288602 MEX3AA1L020 520 aaKnown RBP16.29■□□□□ 0.2
BRAF-201ENST00000288602 SH2D1BO14796 132 aa16.29■□□□□ 0.2
BRAF-201ENST00000288602 HOXD4P09016 255 aaPredicted RBP16.29■□□□□ 0.2
BRAF-201ENST00000288602 BEND4Q6ZU67 534 aa16.29■□□□□ 0.2
BRAF-201ENST00000288602 LILRB1Q8NHL6 650 aaPredicted RBP16.29■□□□□ 0.2
BRAF-201ENST00000288602 S100PBPQ96BU1 408 aa16.29■□□□□ 0.2
BRAF-201ENST00000288602 TAF9BQ9HBM6 251 aa16.29■□□□□ 0.2
BRAF-201ENST00000288602 OR2W1Q9Y3N9 320 aa16.29■□□□□ 0.2
BRAF-201ENST00000288602 CEP295Q9C0D2 2601 aa16.29■□□□□ 0.2
BRAF-201ENST00000288602 CACNA1DQ01668 2161 aa16.29■□□□□ 0.2
BRAF-201ENST00000288602 HAND1O96004 215 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 AKR1C2P52895 323 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 AKR1C1Q04828 323 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 ZNF146Q15072 292 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 P2RY6Q15077 328 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 SELENOHQ8IZQ5 122 aaKnown RBP16.28■□□□□ 0.2
BRAF-201ENST00000288602 FAM185AQ8N0U4 392 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 BOD1Q96IK1 185 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 PARP12Q9H0J9 701 aaKnown RBP16.28■□□□□ 0.2
BRAF-201ENST00000288602 TMED3Q9Y3Q3 217 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 SLC25A15Q9Y619 301 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 ICE1Q9Y2F5 2266 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 CHD3Q12873 2000 aaKnown RBP16.28■□□□□ 0.2
BRAF-201ENST00000288602 PROB1E7EW31 1015 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 FBXO24O75426 580 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 PGLYRP1O75594 196 aaPredicted RBP16.28■□□□□ 0.2
BRAF-201ENST00000288602 GLAP06280 429 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 GCH1P30793 250 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 MSMPQ1L6U9 139 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 LRP11Q86VZ4 500 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 H1FOOQ8IZA3 346 aaPredicted RBP16.28■□□□□ 0.2
BRAF-201ENST00000288602 OR51H1Q8NH63 302 aa16.28■□□□□ 0.2
BRAF-201ENST00000288602 RCL1Q9Y2P8 373 aaKnown RBP16.28■□□□□ 0.2
BRAF-201ENST00000288602 FAM157CP0CG43 387 aa16.27■□□□□ 0.2
BRAF-201ENST00000288602 ARHGDIBP52566 201 aa16.27■□□□□ 0.2
BRAF-201ENST00000288602 ZNF718Q3SXZ3 478 aa16.27■□□□□ 0.2
BRAF-201ENST00000288602 CMTM1Q8IZ96 169 aa16.27■□□□□ 0.2
BRAF-201ENST00000288602 BCL2L14Q9BZR8 327 aa16.27■□□□□ 0.2
BRAF-201ENST00000288602 DUSP13Q9UII6 198 aa16.27■□□□□ 0.2
BRAF-201ENST00000288602 TMEM210A6NLX4 147 aa16.27■□□□□ 0.19
BRAF-201ENST00000288602 M0R1B8 84 aa16.27■□□□□ 0.19
BRAF-201ENST00000288602 HSPA12AO43301 675 aa16.27■□□□□ 0.19
BRAF-201ENST00000288602 FGF16O43320 207 aa16.27■□□□□ 0.19
BRAF-201ENST00000288602 ADAM20O43506 726 aa16.27■□□□□ 0.19
BRAF-201ENST00000288602 ASCL1P50553 236 aa16.27■□□□□ 0.19
BRAF-201ENST00000288602 BTN1A1Q13410 526 aa16.27■□□□□ 0.19
BRAF-201ENST00000288602 FAM53AQ6NSI3 398 aaPredicted RBP16.27■□□□□ 0.19
BRAF-201ENST00000288602 TMEM56Q96MV1 263 aa16.27■□□□□ 0.19
BRAF-201ENST00000288602 RHOFQ9HBH0 211 aa16.27■□□□□ 0.19
BRAF-201ENST00000288602 TMEM56-RWDD3S4R434 201 aa16.27■□□□□ 0.19
BRAF-201ENST00000288602 A0A1B0GW55 424 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 E5RGE8 158 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 ATP6V1G2-DDX39BF2Z307 99 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 DUX4L2P0CJ85 424 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 DUX4L3P0CJ86 424 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 DUX4L4P0CJ87 422 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 DUX4L5P0CJ88 424 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 DUX4L6P0CJ89 424 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 DUX4L7P0CJ90 424 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 RND3P61587 244 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 NHLH2Q02577 135 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 WDR82Q6UXN9 313 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 EIF4E3Q8N5X7 224 aaKnown RBP16.26■□□□□ 0.19
BRAF-201ENST00000288602 OR4D5Q8NGN0 318 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 RNF141Q8WVD5 230 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 AIFM2Q9BRQ8 373 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 MAGT1Q9H0U3 335 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 CXXC4Q9H2H0 198 aa16.26■□□□□ 0.19
BRAF-201ENST00000288602 ESRP2Q9H6T0 727 aaKnown RBP16.26■□□□□ 0.19
BRAF-201ENST00000288602 DUX4Q9UBX2 424 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms