RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 TAS2R30P59541 319 aa11.33□□□□□ -0.6
SLC28A1-201ENST00000286749 TMEM267Q0VDI3 215 aaPredicted RBP11.33□□□□□ -0.6
SLC28A1-201ENST00000286749 IL24Q13007 206 aa11.33□□□□□ -0.6
SLC28A1-201ENST00000286749 THNSL2Q86YJ6 484 aa11.33□□□□□ -0.6
SLC28A1-201ENST00000286749 POM121Q96HA1 1249 aa11.33□□□□□ -0.6
SLC28A1-201ENST00000286749 A0A096LPE4 126 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 KIR2DS1A0A191URI9 304 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 A0A1W2PPZ6 126 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 PGLYRP1O75594 196 aaPredicted RBP11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 KIR2DS4P43632 304 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 KIR2DS1Q14954 304 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 SRSF7Q16629 238 aaKnown RBP eCLIP11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 COLCA1Q6ZS62 124 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 REPIN1Q9BWE0 567 aaKnown RBP11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 ATP23Q9Y6H3 246 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 ESPL1Q14674 2120 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 CHD3Q12873 2000 aaKnown RBP11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 CYB5BO43169 146 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 F10P00742 488 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 HBE1P02100 147 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 GLIPR1P48060 266 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 IZUMO4Q1ZYL8 232 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 PYY3Q5JQD4 70 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 SLC25A24Q6NUK1 477 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 SPNS3Q6ZMD2 512 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 STX12Q86Y82 276 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 ZNF295-AS1Q8N0V1 137 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 LINC00469Q8N7U9 141 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 OR51H1Q8NH63 302 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 DEPPQ9NTK1 212 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 GNG13Q9P2W3 67 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 TCFL5Q9UL49 500 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 FRYLO94915 3013 aa11.32□□□□□ -0.6
SLC28A1-201ENST00000286749 TNRC6AQ8NDV7 1962 aaKnown RBP11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 LOC102723971A0A1B0GUV8 181 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 C5orf49A4QMS7 147 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 TRAPPC2LH3BP13 241 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 CYTIPO60759 359 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 HIST1H2BKO60814 126 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 HIST1H2BJP06899 126 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 HIST1H2BOP23527 126 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 GDF1P27539 372 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 S100A2P29034 98 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 HIST1H2BBP33778 126 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 HIST1H2BDP58876 126 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 HIST1H2BCP62807 126 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 ARF1P84077 181 aaKnown RBP11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 Q0VFX4 171 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 HIST2H2BEQ16778 126 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 KHDC3LQ587J8 217 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 OR2B11Q5JQS5 317 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 CDPF1Q6NVV7 123 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 C20orf204Q6ZNR8 217 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 MRPL21Q7Z2W9 205 aaKnown RBP11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 SLC35E3Q7Z769 313 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 ZDHHC23Q8IYP9 409 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 HIST1H2BHQ93079 126 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 HIST1H2BNQ99877 126 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 HIST1H2BMQ99879 126 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 SIRT7Q9NRC8 400 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 C3orf80F5H4A9 247 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 SYNGR1O43759 233 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 HLA-HP01893 362 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 F2RP25116 425 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 OTX2P32243 289 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 MPV17LQ2QL34 196 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 CEACAM21Q3KPI0 293 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 PCSK4Q6UW60 755 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 DPPA3Q6W0C5 159 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 SAXO1Q8IYX7 474 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 IL22RA2Q969J5 263 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 GPR146Q96CH1 333 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 ZNF488Q96MN9 340 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 RSG1Q9BU20 258 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 GAR1Q9NY12 217 aaKnown RBP11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 NOSIPQ9Y314 301 aaKnown RBP11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 VPS13AQ96RL7 3174 aa11.31□□□□□ -0.6
SLC28A1-201ENST00000286749 DOCK10Q96BY6 2186 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 PINLYPA6NC86 204 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 CXorf65A6NEN9 183 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 DFFBO76075 338 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 IFNA5P01569 189 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 CTXN2P0C2S0 81 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 RAB11AP62491 216 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 HLA-DRB3P79483 266 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 OR8G1Q15617 311 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 MRPL30Q8TCC3 161 aaKnown RBP11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 DMRT1Q9Y5R6 373 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 ZFP92A6NM28 416 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 HS3ST1O14792 307 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 MRPL33O75394 65 aaKnown RBP11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 TRGC2P03986 189 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 JMJD7P0C870 316 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 PSG2P11465 335 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 C9orf152Q5JTZ5 239 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 MKXQ8IYA7 352 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 RNASE11Q8TAA1 199 aaKnown RBP11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 CLDN23Q96B33 292 aa11.3□□□□□ -0.6
SLC28A1-201ENST00000286749 CFIP05156 583 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms