RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 ZNF10P21506 573 aaPredicted RBP7.96□□□□□ -1.13
PDGFC-201ENST00000274071 GPR6P46095 362 aaPredicted RBP7.96□□□□□ -1.13
PDGFC-201ENST00000274071 DYNLT3P51808 116 aa7.96□□□□□ -1.13
PDGFC-201ENST00000274071 PLPPR5Q32ZL2 321 aa7.96□□□□□ -1.13
PDGFC-201ENST00000274071 LINC00114Q6XXX2 140 aa7.96□□□□□ -1.13
PDGFC-201ENST00000274071 CMTM8Q8IZV2 173 aa7.96□□□□□ -1.13
PDGFC-201ENST00000274071 OR8I2Q8N0Y5 310 aa7.96□□□□□ -1.13
PDGFC-201ENST00000274071 TMEM252Q8N6L7 170 aa7.96□□□□□ -1.13
PDGFC-201ENST00000274071 OTOSQ8NHW6 89 aa7.96□□□□□ -1.13
PDGFC-201ENST00000274071 SPACA9Q96E40 222 aaPredicted RBP7.96□□□□□ -1.13
PDGFC-201ENST00000274071 GUCD1Q96NT3 240 aa7.96□□□□□ -1.13
PDGFC-201ENST00000274071 C11orf1Q9H5F2 150 aa7.96□□□□□ -1.13
PDGFC-201ENST00000274071 B4GALT6Q9UBX8 382 aa7.96□□□□□ -1.13
PDGFC-201ENST00000274071 RARRES3Q9UL19 164 aa7.96□□□□□ -1.13
PDGFC-201ENST00000274071 PLXNA2O75051 1894 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 HIDE1A8MVS5 230 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 CKS1BP61024 79 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 TMEM187Q14656 261 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 KIAA1644Q3SXP7 199 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 SLC48A1Q6P1K1 146 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 Q6ZVL8 140 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 MARCH3Q86UD3 253 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 ODF3L1Q8IXM7 274 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 HDAC8Q9BY41 377 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 VSIRQ9H7M9 311 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 PLEKHF2Q9H8W4 249 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 CHODLQ9H9P2 273 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 GPR27Q9NS67 375 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 CCL26Q9Y258 94 aa7.96□□□□□ -1.14
PDGFC-201ENST00000274071 TMEM14DPA8MWL7 114 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 ALG1L2C9J202 215 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 C4orf51C9J302 202 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 P2RY10O00398 339 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 CTSEP14091 401 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 ARFRP1Q13795 201 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 ZNF74Q16587 644 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.95□□□□□ -1.14
PDGFC-201ENST00000274071 DCST2Q5T1A1 773 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 ZNF765Q7L2R6 523 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 MBD3L1Q8WWY6 194 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 ARHGAP5-AS1Q96IT6 56 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 PGPEP1Q9NXJ5 209 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 HHLA2Q9UM44 414 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 CHD9Q3L8U1 2897 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 C3orf79P0CE67 100 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 S100GP29377 79 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 PIGPP57054 158 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 TAS2R46P59540 309 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 C5orf64Q2M2E5 130 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 HLA-BQ31612 363 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 ABHD17CQ6PCB6 329 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 WDR82Q6UXN9 313 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 RNF144BQ7Z419 303 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 NEUROG1Q92886 237 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 LMLNQ96KR4 655 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 FOXN4Q96NZ1 517 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 SIGMAR1Q99720 223 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 WASHC3Q9Y3C0 194 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 SELENOKQ9Y6D0 94 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 ERI3O43414 337 aaKnown RBP7.95□□□□□ -1.14
PDGFC-201ENST00000274071 ZNF737O75373 536 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 HLA-HP01893 362 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 GYPAP02724 150 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 UCP1P25874 307 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 RPS4XP62701 263 aaKnown RBP7.95□□□□□ -1.14
PDGFC-201ENST00000274071 HTD2P86397 168 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 MEF2BQ02080 365 aaPredicted RBP7.95□□□□□ -1.14
PDGFC-201ENST00000274071 BAXQ07812 192 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 FOXL1Q12952 345 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 HIST3H3Q16695 136 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 SPIN3Q5JUX0 258 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 TSPO2Q5TGU0 170 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 PRAMEF5Q5TYX0 476 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 PRAMEF6Q5VXH4 476 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 RNF44Q7L0R7 432 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 HSD11B1LQ7Z5J1 315 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 TMEM25Q86YD3 366 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 MRPL43Q8N983 215 aaKnown RBP7.95□□□□□ -1.14
PDGFC-201ENST00000274071 OR2Z1Q8NG97 314 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 OR4P4Q8NGL7 312 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 KCNG3Q8TAE7 436 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 DOK4Q8TEW6 326 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 C18orf12Q96KH6 178 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 LRRC3BQ96PB8 259 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 THAP10Q9P2Z0 257 aaPredicted RBP7.95□□□□□ -1.14
PDGFC-201ENST00000274071 OR51B2Q9Y5P1 312 aa7.95□□□□□ -1.14
PDGFC-201ENST00000274071 GTF3C1Q12789 2109 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 TRAPPC2LH3BP13 241 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 J3QR06 171 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 PPP1CBP62140 327 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 TMEM267Q0VDI3 215 aaPredicted RBP7.94□□□□□ -1.14
PDGFC-201ENST00000274071 PHYHD1Q5SRE7 291 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 OR2V2Q96R30 315 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 GPX7Q96SL4 187 aaPredicted RBP7.94□□□□□ -1.14
PDGFC-201ENST00000274071 TP73-AS1Q9UF72 201 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 MUC21A0A0G2JKD1 596 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 MUC21A0A140T8X8 626 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 LOC107986453A0A1B0GWG9 222 aa7.94□□□□□ -1.14
PDGFC-201ENST00000274071 MPIG6BO95866 241 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms