RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 EBLN2Q6P2I7 272 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 UBE3DQ7Z6J8 389 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 OR2L13Q8N349 312 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 EIF4E3Q8N5X7 224 aaKnown RBP6.86□□□□□ -1.31
USP3-201ENST00000268049 OR2T10Q8NGZ9 312 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 VN1R17PQ8TDU5 208 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 NMNAT3Q96T66 252 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 GSN-AS1Q9NRJ2 163 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 PEMTQ9UBM1 199 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 MAP1LC3B2A6NCE7 125 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 B4DEV8 164 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 OR7C2O60412 319 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 CCL3P10147 92 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 NPY1RP25929 384 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 S100A4P26447 101 aaKnown RBP6.86□□□□□ -1.31
USP3-201ENST00000268049 LOXL3P58215 753 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 GLIPR1L1Q6UWM5 242 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 OR5D18Q8NGL1 313 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 MARCH1Q8TCQ1 289 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 ZNF2Q9BSG1 426 aaPredicted RBP6.86□□□□□ -1.31
USP3-201ENST00000268049 MAP1LC3BQ9GZQ8 125 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 AKIRIN1Q9H9L7 192 aaPredicted RBP6.86□□□□□ -1.31
USP3-201ENST00000268049 TREM2Q9NZC2 230 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 SLC25A10Q9UBX3 287 aaPredicted RBP6.86□□□□□ -1.31
USP3-201ENST00000268049 CNOT1A5YKK6 2376 aaKnown RBP6.86□□□□□ -1.31
USP3-201ENST00000268049 FAM181BA6NEQ2 426 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 C5orf52A6NGY3 159 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 RPL7P18124 248 aaKnown RBP6.86□□□□□ -1.31
USP3-201ENST00000268049 GPX2P18283 190 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 LGALSLQ3ZCW2 172 aaPredicted RBP6.86□□□□□ -1.31
USP3-201ENST00000268049 KIRREL2Q6UWL6 708 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 WFIKKN1Q96NZ8 548 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 TMEM147Q9BVK8 224 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 TINAGQ9UJW2 476 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 TPRP12270 2363 aaKnown RBP6.86□□□□□ -1.31
USP3-201ENST00000268049 A0A087WUJ7 227 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 PRSS37A4D1T9 235 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 OR2W5A6NFC9 320 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 HELTA6NFD8 242 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 FAM74A7A6NL05 159 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 C3orf80F5H4A9 247 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 RBP4P02753 201 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 FAM74A3Q4VXF1 159 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 DLEU7Q6UYE1 221 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 PLA2G12AQ9BZM1 189 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 BEX4Q9NWD9 120 aaPredicted RBP6.86□□□□□ -1.31
USP3-201ENST00000268049 ZNF835Q9Y2P0 537 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 ABCA7Q8IZY2 2146 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 IGHV1-69-2A0A0G2JMI3 117 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 LINC00587B1AMM8 73 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 FAM157AC9JC47 383 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 MFNGO00587 321 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 PTHLHP12272 177 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 TTC32Q5I0X7 151 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 SPANXN5Q5MJ07 72 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 FAM78BQ5VT40 261 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 ZNF343Q6P1L6 599 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 BPIFA4PQ86YQ2 179 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 SPNS2Q8IVW8 549 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 SLC25A19Q9HC21 320 aa6.86□□□□□ -1.31
USP3-201ENST00000268049 ING1Q9UK53 422 aaPredicted RBP6.86□□□□□ -1.31
USP3-201ENST00000268049 FNDC1Q4ZHG4 1894 aaPredicted RBP6.85□□□□□ -1.31
USP3-201ENST00000268049 ZNF716A6NP11 495 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 HSD17B6O14756 317 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 PI3P19957 117 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 HRH1P35367 487 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 HINT1P49773 126 aaPredicted RBP6.85□□□□□ -1.31
USP3-201ENST00000268049 SELENOPP49908 381 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 YBX1P67809 324 aaKnown RBP6.85□□□□□ -1.31
USP3-201ENST00000268049 PLAURQ03405 335 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 ATP1A1-AS1Q5TC04 95 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 ANGPTL5Q86XS5 388 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 TGIF2LYQ8IUE0 185 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 LPAR5Q9H1C0 372 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 TMEM38AQ9H6F2 299 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 ASIC5Q9NY37 505 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 UNC13CQ8NB66 2214 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 LMX1BO60663 402 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 ORM1P02763 201 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 VSIG10L2P0DP72 767 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 ACSM6Q6P461 480 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 PINX1Q96BK5 328 aaKnown RBP6.85□□□□□ -1.31
USP3-201ENST00000268049 OR2D2Q9H210 308 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 NAGKQ9UJ70 344 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 SIRT4Q9Y6E7 314 aaPredicted RBP6.85□□□□□ -1.31
USP3-201ENST00000268049 SPTBN2O15020 2390 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 ASXL3Q9C0F0 2248 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 MPZL1O95297 269 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 EPPINO95925 133 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 IL18BPO95998 194 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 RPS4Y1P22090 263 aaKnown RBP6.85□□□□□ -1.31
USP3-201ENST00000268049 CA6P23280 308 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 IFITM2Q01629 132 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 TMEM128Q5BJH2 165 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 TMEM229BQ8NBD8 167 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 OR10P1Q8NGE3 313 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 SPSB1Q96BD6 273 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 TEX37Q96LM6 180 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 OR8B4Q96RC9 309 aa6.85□□□□□ -1.31
USP3-201ENST00000268049 TEAD3Q99594 435 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms