RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 OR5G3P0C626 314 aa10.09□□□□□ -0.79
VPS33A-201ENST00000267199 TRGC1P0CF51 173 aa10.09□□□□□ -0.79
VPS33A-201ENST00000267199 MNX1P50219 401 aaPredicted RBP10.09□□□□□ -0.79
VPS33A-201ENST00000267199 CCL11P51671 97 aa10.09□□□□□ -0.79
VPS33A-201ENST00000267199 CXorf66Q5JRM2 361 aaPredicted RBP10.09□□□□□ -0.79
VPS33A-201ENST00000267199 LY6G6FQ5SQ64 297 aa10.09□□□□□ -0.79
VPS33A-201ENST00000267199 OR2M3Q8NG83 312 aa10.09□□□□□ -0.79
VPS33A-201ENST00000267199 MRGPRFQ96AM1 343 aa10.09□□□□□ -0.79
VPS33A-201ENST00000267199 RAB9BQ9NP90 201 aa10.09□□□□□ -0.79
VPS33A-201ENST00000267199 CACNA1GO43497 2377 aa10.09□□□□□ -0.79
VPS33A-201ENST00000267199 TCF21O43680 179 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 CDS2O95674 445 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 GYPAP02724 150 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 CCL3P10147 92 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 CCL4P13236 92 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 ZNF708P17019 499 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 EIF4E3Q8N5X7 224 aaKnown RBP10.08□□□□□ -0.8
VPS33A-201ENST00000267199 MRPL30Q8TCC3 161 aaKnown RBP10.08□□□□□ -0.8
VPS33A-201ENST00000267199 ZNF385AQ96PM9 386 aaKnown RBP10.08□□□□□ -0.8
VPS33A-201ENST00000267199 TMEM9BQ9NQ34 198 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 TREM2Q9NZC2 230 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 WNT16Q9UBV4 365 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 C11orf94C9JXX5 98 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 RAC3P60763 192 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 COTL1Q14019 142 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 C16orf82Q7Z2V1 217 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 MUCL1Q96DR8 90 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 REG4Q9BYZ8 158 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 PLA2G3Q9NZ20 509 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 ZNHIT1O43257 154 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 IGLV3-21P80748 117 aaPredicted RBP10.08□□□□□ -0.8
VPS33A-201ENST00000267199 KHDC3LQ587J8 217 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 OR52M1Q8NGK5 317 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 CBLN4Q9NTU7 201 aa10.08□□□□□ -0.8
VPS33A-201ENST00000267199 KLF13Q9Y2Y9 288 aaPredicted RBP10.08□□□□□ -0.8
VPS33A-201ENST00000267199 RIF1Q5UIP0 2472 aaKnown RBP10.08□□□□□ -0.8
VPS33A-201ENST00000267199 LOC101059948A0A1B0GTJ6 334 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 TOX3O15405 576 aaPredicted RBP10.07□□□□□ -0.8
VPS33A-201ENST00000267199 PLPPR5Q32ZL2 321 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 TGIF2LXQ8IUE1 241 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 GALMQ96C23 342 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 KCNK17Q96T54 332 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 FAM173AQ9BQD7 235 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 SLC2A8Q9NY64 477 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 SH3BGRL2Q9UJC5 107 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 TCF20Q9UGU0 1960 aaKnown RBP10.07□□□□□ -0.8
VPS33A-201ENST00000267199 CCKARP32238 428 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 TMEM50BP56557 158 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 ZP4Q12836 540 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 RNASEKQ6P5S7 137 aaKnown RBP10.07□□□□□ -0.8
VPS33A-201ENST00000267199 TECTBQ96PL2 329 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 ZNF391Q9UJN7 358 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 PRR32B1ATL7 298 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 MS4A18H0YCH9 400 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 BCL2P10415 239 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 CA6P23280 308 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 SRD5A2P31213 254 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 FAM3BP58499 235 aaPredicted RBP10.07□□□□□ -0.8
VPS33A-201ENST00000267199 MS4A18Q3C1V0 323 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 MRGPRGQ86SM5 289 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 PCGF1Q9BSM1 259 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 TMEM204Q9BSN7 226 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 PLXNA3P51805 1871 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 ROS1P08922 2347 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 IGHV3-43A0A0B4J1X8 118 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 CHEK1O14757 476 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 ZNF253O75346 499 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 RPLP1P05386 114 aaKnown RBP10.07□□□□□ -0.8
VPS33A-201ENST00000267199 IGHV3-43DP0DP04 118 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 HLA-GP17693 338 aa10.07□□□□□ -0.8
VPS33A-201ENST00000267199 TRDCB7Z8K6 153 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 TMEM11P17152 192 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 TNFSF4P23510 183 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 MDH2P40926 338 aaKnown RBP10.06□□□□□ -0.8
VPS33A-201ENST00000267199 ZNF519Q8TB69 540 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 M1APQ8TC57 530 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 SSUH2Q9Y2M2 353 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 GOLT1BQ9Y3E0 138 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 R4GN57 208 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 GNG3P63215 75 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 ATG101Q9BSB4 218 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.06□□□□□ -0.8
VPS33A-201ENST00000267199 DHRS7CA6NNS2 312 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 FCGR3AP08637 254 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 CAMPP49913 170 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 SHISA5Q8N114 240 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 POC1AQ8NBT0 407 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 OR2Y1Q8NGV0 311 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 CHST5Q9GZS9 411 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 MPDZO75970 2070 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 GPR179Q6PRD1 2367 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 NLRC5Q86WI3 1866 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 NGFP01138 241 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 IGKV3-11P04433 115 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 DANCRP0C864 163 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 RSPO4Q2I0M5 234 aaPredicted RBP10.06□□□□□ -0.8
VPS33A-201ENST00000267199 OR10G8Q8NGN5 311 aa10.06□□□□□ -0.8
VPS33A-201ENST00000267199 IGHV5-10-1A0A0J9YXX1 117 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 LYPD3O95274 346 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 ISG15P05161 165 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms