RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 NARS2Q96I59 477 aaKnown RBP7.9□□□□□ -1.14
SSR3-201ENST00000265044 MEGF10Q96KG7 1140 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 SLA2Q9H6Q3 261 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 SLC2A8Q9NY64 477 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 MBD2Q9UBB5 411 aa7.9□□□□□ -1.14
SSR3-201ENST00000265044 RALYQ9UKM9 306 aaKnown RBP7.9□□□□□ -1.14
SSR3-201ENST00000265044 KIAA1549Q9HCM3 1950 aa7.9□□□□□ -1.15
SSR3-201ENST00000265044 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.9□□□□□ -1.15
SSR3-201ENST00000265044 ZNF735P0CB33 412 aa7.9□□□□□ -1.15
SSR3-201ENST00000265044 PGA5P0DJD9 388 aa7.9□□□□□ -1.15
SSR3-201ENST00000265044 OMGP23515 440 aa7.9□□□□□ -1.15
SSR3-201ENST00000265044 CATR1Q13166 79 aa7.9□□□□□ -1.15
SSR3-201ENST00000265044 SURF2Q15527 256 aaPredicted RBP7.9□□□□□ -1.15
SSR3-201ENST00000265044 HFEQ30201 348 aa7.9□□□□□ -1.15
SSR3-201ENST00000265044 FAHD2BQ6P2I3 314 aaPredicted RBP7.9□□□□□ -1.15
SSR3-201ENST00000265044 MITD1Q8WV92 249 aa7.9□□□□□ -1.15
SSR3-201ENST00000265044 FAHD2AQ96GK7 314 aa7.9□□□□□ -1.15
SSR3-201ENST00000265044 CCL13Q99616 98 aa7.9□□□□□ -1.15
SSR3-201ENST00000265044 PLEKHF2Q9H8W4 249 aa7.9□□□□□ -1.15
SSR3-201ENST00000265044 Q9N2K0 584 aa7.9□□□□□ -1.15
SSR3-201ENST00000265044 UBQLN2Q9UHD9 624 aa7.9□□□□□ -1.15
SSR3-201ENST00000265044 OPN4Q9UHM6 478 aa7.9□□□□□ -1.15
SSR3-201ENST00000265044 B8ZZF3 427 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 HEXAP06865 529 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 S100A11P31949 105 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 KRTAP27-1Q3LI81 207 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 ELP2Q6IA86 826 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 WDR82Q6UXN9 313 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 SSX8Q7RTT4 187 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 OR5M8Q8NGP6 311 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 TCTEX1D2Q8WW35 142 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 ZNF75AQ96N20 296 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 NARFLQ9H6Q4 476 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 NAA60Q9H7X0 242 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 ZDHHC8Q9ULC8 765 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 NPTNQ9Y639 398 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 DSPP15924 2871 aaKnown RBP7.89□□□□□ -1.15
SSR3-201ENST00000265044 TRGV10A0A0A0MS01 117 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 ADAM20O43506 726 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 GYPAP02724 150 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 CA7P43166 264 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 GLIPR1P48060 266 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 Q5BKY6 102 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 ALKAL2Q6UX46 152 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 ACP7Q6ZNF0 438 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 SLC36A1Q7Z2H8 476 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 FAM185AQ8N0U4 392 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 RELL2Q8NC24 303 aaPredicted RBP7.89□□□□□ -1.15
SSR3-201ENST00000265044 MRPL24Q96A35 216 aaKnown RBP7.89□□□□□ -1.15
SSR3-201ENST00000265044 CLCC1Q96S66 551 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 RNF115Q9Y4L5 304 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 TRAV24A0A0B4J272 114 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 DPRXA6NFQ7 191 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 KITLGP21583 273 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 TDGF1P3P51864 188 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 H2BFSP57053 126 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 SRPXP78539 464 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 POC1AQ8NBT0 407 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 NRIP2Q9BQI9 281 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 HINT2Q9BX68 163 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 PSG11Q9UQ72 335 aa7.89□□□□□ -1.15
SSR3-201ENST00000265044 DMXL2Q8TDJ6 3036 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 C3orf85A0A1B0GTC6 90 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 ZG16O60844 167 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 SWI5Q1ZZU3 235 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 ST6GALNAC3Q8NDV1 305 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 OR4A4PQ8NGN8 299 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 TMEM171Q8WVE6 324 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 OR2W1Q9Y3N9 320 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 TRAV38-1A0A0B4J264 116 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 A0A0B4J2A0 478 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 OOEPA6NGQ2 149 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 SNAPC5O75971 98 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 RGS11O94810 467 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 PTBP3O95758 552 aaKnown RBP7.88□□□□□ -1.15
SSR3-201ENST00000265044 IGLV1-44P01699 117 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 GPR12P47775 334 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 C2orf68Q2NKX9 166 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 MBNL2Q5VZF2 373 aaKnown RBP7.88□□□□□ -1.15
SSR3-201ENST00000265044 ASCL4Q6XD76 172 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 TBC1D26Q86UD7 250 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 SSC4DQ8WTU2 575 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 RNASE6Q93091 150 aaKnown RBP7.88□□□□□ -1.15
SSR3-201ENST00000265044 C2orf50Q96LR7 162 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 SUCNR1Q9BXA5 334 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 OR2D2Q9H210 308 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 SHPKQ9UHJ6 478 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 FRYQ5TBA9 3013 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 MALRD1Q5VYJ5 2156 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 POM121CA8CG34 1229 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 RNF212BA8MTL3 300 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 K7EPK0 472 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 MPPED1O15442 326 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 PRH1P02810 166 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 CD37P11049 281 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 PPP1CCP36873 323 aaKnown RBP7.88□□□□□ -1.15
SSR3-201ENST00000265044 GUSBP1Q15486 140 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 Q6ZR03 302 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 ZNF767PQ75MW2 155 aa7.88□□□□□ -1.15
SSR3-201ENST00000265044 FAM71E2Q8N5Q1 922 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms