RNA–Protein interactions for RNA: ENST00000264645.11

CASC3-201, Transcript of CASC3, exon junction complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASC3, Length 4,116 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-201ENST00000264645 TNFRSF9Q07011 255 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 SCGB2A2Q13296 93 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 MRPL54Q6P161 138 aaKnown RBP13.15□□□□□ -0.3
CASC3-201ENST00000264645 ANKRD33Q7Z3H0 272 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 ZNF738Q8NE65 137 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 SHDQ96IW2 340 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 TMEM147Q9BVK8 224 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 FAM206AQ9NX38 181 aa13.15□□□□□ -0.3
CASC3-201ENST00000264645 CTSBP07858 339 aa13.15□□□□□ -0.31
CASC3-201ENST00000264645 USF1P22415 310 aaPredicted RBP13.15□□□□□ -0.31
CASC3-201ENST00000264645 SLC35B1P78383 322 aa13.15□□□□□ -0.31
CASC3-201ENST00000264645 OR10V1Q8NGI7 309 aa13.15□□□□□ -0.31
CASC3-201ENST00000264645 OR4X1Q8NH49 305 aa13.15□□□□□ -0.31
CASC3-201ENST00000264645 BOD1Q96IK1 185 aa13.15□□□□□ -0.31
CASC3-201ENST00000264645 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.15□□□□□ -0.31
CASC3-201ENST00000264645 TDRD6O60522 2096 aaKnown RBP13.14□□□□□ -0.31
CASC3-201ENST00000264645 CTXND1A0A1B0GTU2 59 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 OR10J4P0C629 311 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 MYF5P13349 255 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 CAMPP49913 170 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 ZNF506Q5JVG8 444 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 C1QL2Q7Z5L3 287 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 RPS19BP1Q86WX3 136 aaKnown RBP13.14□□□□□ -0.31
CASC3-201ENST00000264645 ZNF573Q86YE8 665 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 OR5D13Q8NGL4 314 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 OR6X1Q8NH79 312 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 C22orf15Q8WYQ4 148 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 FOXB1Q99853 325 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 TMEM222Q9H0R3 208 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 MGAMO43451 1857 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 SPTY2D1-AS1A0A0U1RR47 76 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 LRRC3CA6NJW4 275 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 FGF5P12034 268 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 CEACAM6P40199 344 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 UBE2G1P62253 170 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 SERF2P84101 59 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 TMEM187Q14656 261 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 RTP5Q14D33 572 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 JOSD1Q15040 202 aaPredicted RBP13.14□□□□□ -0.31
CASC3-201ENST00000264645 ACSM6Q6P461 480 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 OR1L6Q8NGR2 347 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 DNAJC4Q9NNZ3 241 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 OBP2AQ9NY56 170 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 IGSF23A1L1A6 192 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 HPRT1P00492 218 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 PSG2P11465 335 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 FOXL2P58012 376 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 SPRED2Q7Z698 418 aa13.14□□□□□ -0.31
CASC3-201ENST00000264645 ASXL3Q9C0F0 2248 aa13.13□□□□□ -0.31
CASC3-201ENST00000264645 SPINT2O43291 252 aa13.13□□□□□ -0.31
CASC3-201ENST00000264645 NDUFB4O95168 129 aa13.13□□□□□ -0.31
CASC3-201ENST00000264645 RAB35Q15286 201 aa13.13□□□□□ -0.31
CASC3-201ENST00000264645 EGR1P18146 543 aa13.13□□□□□ -0.31
CASC3-201ENST00000264645 EIF3IQ13347 325 aaKnown RBP13.13□□□□□ -0.31
CASC3-201ENST00000264645 ABHD17BQ5VST6 288 aa13.13□□□□□ -0.31
CASC3-201ENST00000264645 WDR61Q9GZS3 305 aaKnown RBP13.13□□□□□ -0.31
CASC3-201ENST00000264645 LOC390937A0A1W2PQ73 354 aa13.13□□□□□ -0.31
CASC3-201ENST00000264645 SMIM10L1P0DMW3 83 aa13.13□□□□□ -0.31
CASC3-201ENST00000264645 GCH1P30793 250 aa13.13□□□□□ -0.31
CASC3-201ENST00000264645 GNG4P50150 75 aa13.13□□□□□ -0.31
CASC3-201ENST00000264645 RAB7AP51149 207 aa13.13□□□□□ -0.31
CASC3-201ENST00000264645 ERVFRD-1P60508 538 aa13.13□□□□□ -0.31
CASC3-201ENST00000264645 AARDQ4LEZ3 155 aa13.13□□□□□ -0.31
CASC3-201ENST00000264645 CISD2Q8N5K1 135 aaKnown RBP13.13□□□□□ -0.31
CASC3-201ENST00000264645 SMIM10Q96HG1 83 aa13.13□□□□□ -0.31
CASC3-201ENST00000264645 KLF2Q9Y5W3 355 aaPredicted RBP13.13□□□□□ -0.31
CASC3-201ENST00000264645 A0A087WWC5 75 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 CHEK1O14757 476 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 CHRNB4P30926 498 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 RPEL1Q2QD12 228 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 Q56UQ5 140 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 ARSJQ5FYB0 599 aaPredicted RBP13.12□□□□□ -0.31
CASC3-201ENST00000264645 LEMD1Q68G75 181 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 RBMXL3Q8N7X1 1067 aaKnown RBP13.12□□□□□ -0.31
CASC3-201ENST00000264645 OR2V1Q8NHB1 315 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 RPP25Q9BUL9 199 aaKnown RBP13.12□□□□□ -0.31
CASC3-201ENST00000264645 RNF122Q9H9V4 155 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 FOXD3Q9UJU5 478 aaPredicted RBP13.12□□□□□ -0.31
CASC3-201ENST00000264645 DOCK8Q8NF50 2099 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 TRBV6-7A0A0A0MS04 114 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 DBX1A6NMT0 343 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 FOLR3P41439 243 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 PAFAH1B2P68402 229 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 RFESDQ8TAC1 157 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 ZNF519Q8TB69 540 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 LRRC61Q9BV99 259 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 PARD6GQ9BYG4 376 aaPredicted RBP13.12□□□□□ -0.31
CASC3-201ENST00000264645 PARLQ9H300 379 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 LOC102723971A0A1B0GUV8 181 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 CCL2P13500 99 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 SELENOVP59797 346 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 MST1LQ2TV78 715 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 SPATA45Q537H7 98 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 SPATA46Q5T0L3 261 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 TMEM211Q6ICI0 200 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 VASH2Q86V25 355 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 TBX21Q9UL17 535 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 WASHC3Q9Y3C0 194 aa13.12□□□□□ -0.31
CASC3-201ENST00000264645 A0A1W2PQD3 144 aa13.11□□□□□ -0.31
CASC3-201ENST00000264645 SH2D1BO14796 132 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms