RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ORC5O43913 435 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 FAM90A15PP0C7V4 464 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 FAM90A13PP0C7W8 464 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 FAM90A14PP0C7W9 464 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 FAM90A24PP0C7X0 464 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 MAPK3P27361 379 aaPredicted RBP12.84□□□□□ -0.35
USE1-201ENST00000263897 VDAC2P45880 294 aaPredicted RBP12.84□□□□□ -0.35
USE1-201ENST00000263897 MADCAM1Q13477 382 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 PDLIM3Q53GG5 364 aaPredicted RBP12.84□□□□□ -0.35
USE1-201ENST00000263897 FBLN7Q53RD9 439 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 ZNF497Q6ZNH5 498 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 MS4A15Q8N5U1 240 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 NEK7Q8TDX7 302 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 NRG4Q8WWG1 115 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 TOMM40LQ969M1 308 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 ARL11Q969Q4 196 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 RPEQ96AT9 228 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 SPACA1Q9HBV2 294 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 SCN3BQ9NY72 215 aa12.84□□□□□ -0.35
USE1-201ENST00000263897 RCC2Q9P258 522 aaKnown RBP12.84□□□□□ -0.35
USE1-201ENST00000263897 PLXNB1O43157 2135 aa12.83□□□□□ -0.35
USE1-201ENST00000263897 CMYA5Q8N3K9 4069 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 MCRIP1C9JLW8 97 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 C15orf65H3BRN8 121 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 AMY1AP04745 511 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 AMY2AP04746 511 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 FAM106CPP0CH98 169 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 SPHARQ15513 63 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 TMEM95Q3KNT9 176 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 ABCA11PQ4W5N1 156 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 ACSM3Q53FZ2 586 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 AWAT2Q6E213 333 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 LYG1Q8N1E2 194 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 OR52M1Q8NGK5 317 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 CCDC107Q8WV48 283 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 UQCC2Q9BRT2 126 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 MND1Q9BWT6 205 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 BANF2Q9H503 90 aa12.83□□□□□ -0.36
USE1-201ENST00000263897 A0A1W2PPE3 182 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 FAM90A10PA6NDY2 464 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 FAM90A7PA6NKC0 464 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 FAM90A23PA8MXZ1 464 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 H0YHG0 523 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 OPN1MWP04001 364 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 OPN1MW2P0DN77 364 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 OPN1MW3P0DN78 364 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 MGMTP16455 207 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 GNG10P50151 68 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 RAB7AP51149 207 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 AQP4P55087 323 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 GP2P55259 537 aaKnown RBP12.82□□□□□ -0.36
USE1-201ENST00000263897 GABPB1Q06547 395 aaPredicted RBP12.82□□□□□ -0.36
USE1-201ENST00000263897 DIAPH2-AS1Q14236 149 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 INSL4Q14641 139 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 NSUN5P1Q3KNT7 163 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 RAB12Q6IQ22 244 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 NDUFA11Q86Y39 141 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 NKAIN3Q8N8D7 197 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 TMEM104Q8NE00 496 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 OR5AU1Q8NGC0 362 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 CITED2Q99967 270 aaPredicted RBP12.82□□□□□ -0.36
USE1-201ENST00000263897 SELENOIQ9C0D9 397 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 LSM2Q9Y333 95 aaKnown RBP12.82□□□□□ -0.36
USE1-201ENST00000263897 PEX16Q9Y5Y5 336 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 TGP01266 2768 aa12.82□□□□□ -0.36
USE1-201ENST00000263897 A0A1W2PPI3 338 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 ADARB2-AS1A8MUL3 147 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 M0QZK8 103 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 AIPO00170 330 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 CRTAPO75718 401 aaPredicted RBP12.81□□□□□ -0.36
USE1-201ENST00000263897 GLAP06280 429 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 LPLP06858 475 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 SNRNP70P08621 437 aaKnown RBP12.81□□□□□ -0.36
USE1-201ENST00000263897 FUT3P21217 361 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 LOXL3P58215 753 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 CD83Q01151 205 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 GPR50Q13585 617 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 IRF3Q14653 427 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 CENPVQ7Z7K6 275 aaPredicted RBP12.81□□□□□ -0.36
USE1-201ENST00000263897 OR8H3Q8N146 312 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 GAPTQ8N292 157 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 DRAM1Q8N682 238 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 OR10X1Q8NGY0 326 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 OR56B4Q8NH76 319 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 UBALD1Q8TB05 177 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 SGCDQ92629 289 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 Q96M66 194 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 ETAA1Q9NY74 926 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 GHRLQ9UBU3 117 aa12.81□□□□□ -0.36
USE1-201ENST00000263897 SDCBPO00560 298 aaPredicted RBP12.8□□□□□ -0.36
USE1-201ENST00000263897 CA11O75493 328 aa12.8□□□□□ -0.36
USE1-201ENST00000263897 GAPDHP04406 335 aaKnown RBP12.8□□□□□ -0.36
USE1-201ENST00000263897 VHLP40337 213 aa12.8□□□□□ -0.36
USE1-201ENST00000263897 SLC35A2P78381 396 aa12.8□□□□□ -0.36
USE1-201ENST00000263897 MED22Q15528 200 aa12.8□□□□□ -0.36
USE1-201ENST00000263897 FAM27D1Q5T7N8 215 aa12.8□□□□□ -0.36
USE1-201ENST00000263897 SYT6Q5T7P8 510 aaPredicted RBP12.8□□□□□ -0.36
USE1-201ENST00000263897 SIGIRRQ6IA17 410 aa12.8□□□□□ -0.36
USE1-201ENST00000263897 LRRTM1Q86UE6 522 aa12.8□□□□□ -0.36
USE1-201ENST00000263897 C1QL4Q86Z23 238 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms