RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 COL5A1-AS1Q5SY13 56 aa15.42■□□□□ 0.06
NOTCH3-201ENST00000263388 NEU3Q9UQ49 428 aa15.42■□□□□ 0.06
NOTCH3-201ENST00000263388 C3orf80F5H4A9 247 aa15.42■□□□□ 0.06
NOTCH3-201ENST00000263388 HIST1H1EP10412 219 aaKnown RBP15.42■□□□□ 0.06
NOTCH3-201ENST00000263388 COL11A2P13942 1736 aaPredicted RBP15.42■□□□□ 0.06
NOTCH3-201ENST00000263388 SKP2Q13309 424 aa15.42■□□□□ 0.06
NOTCH3-201ENST00000263388 OR1L6Q8NGR2 347 aa15.42■□□□□ 0.06
NOTCH3-201ENST00000263388 SMDT1Q9H4I9 107 aa15.42■□□□□ 0.06
NOTCH3-201ENST00000263388 ZXDAP98168 799 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 COL19A1Q14993 1142 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 OR4C46A6NHA9 309 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 LYZL6O75951 148 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 HLA-DRB5Q30154 266 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 CRHP06850 196 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 BRS3P32247 399 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 PDCD1Q15116 288 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 OR4A47Q6IF82 309 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 STXBP6Q8NFX7 210 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 SLC25A33Q9BSK2 321 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 MRM2Q9UI43 246 aaKnown RBP15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 A0A1B0GU03 582 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 APCSP02743 223 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 LRRC29Q8WV35 223 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 C19orf57Q0VDD7 668 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 IZUMO4Q1ZYL8 232 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 DMKNQ6E0U4 476 aaPredicted RBP15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 FAM109BQ6ICB4 259 aaPredicted RBP15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 ZNF788Q6ZQV5 615 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 RFESDQ8TAC1 157 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 EID2BQ96D98 161 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 RSG1Q9BU20 258 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 ADIPOQQ15848 244 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 COL25A1Q9BXS0 654 aaPredicted RBP15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 CACNA1EQ15878 2313 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 SYNGR2O43760 224 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 ZNF25P17030 456 aaPredicted RBP15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 ZNF345Q14585 488 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 PRSS41Q7RTY9 318 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 R3HDM4Q96D70 268 aa15.41■□□□□ 0.06
NOTCH3-201ENST00000263388 GALNSP34059 522 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 PWWP2BQ6NUJ5 590 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 ZNF738Q8NE65 137 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 RASL11BQ9BPW5 248 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 PITPNC1Q9UKF7 332 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 LOC285556D6RIA3 1793 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 DNPH1O43598 174 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 POLR2GP62487 172 aaKnown RBP eCLIP15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 YBX1P67809 324 aaKnown RBP15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 GAMTQ14353 236 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 H3BMH7 237 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 GABRG3Q99928 467 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 SHANK3Q9BYB0 1731 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 DLK1P80370 383 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 SEZ6L2Q6UXD5 910 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 MRGPRGQ86SM5 289 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 MRPS16Q9Y3D3 137 aaKnown RBP15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 LYPD8Q6UX82 237 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 OR8A1Q8NGG7 326 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 GLI3P10071 1580 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 COL8A1P27658 744 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 SF3B5Q9BWJ5 86 aaKnown RBP15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 PLA2G3Q9NZ20 509 aa15.4■□□□□ 0.06
NOTCH3-201ENST00000263388 ANAPC1Q9H1A4 1944 aa15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 ELOVL1Q9BW60 279 aa15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 CHST1O43916 411 aa15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 KIR2DL1P43626 348 aaPredicted RBP15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 KIR2DL2P43627 348 aaPredicted RBP15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 ANKRD55Q3KP44 614 aa15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 SELENOPP49908 381 aa15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 ST6GAL2Q96JF0 529 aa15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 OPN4Q9UHM6 478 aa15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 A0A1W2PQD3 144 aa15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 PPYP01298 95 aa15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 DENND4AQ7Z401 1863 aa15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 GABRA1P14867 456 aa15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 MPV17LQ2QL34 196 aa15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 C1RLQ9NZP8 487 aa15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 V9GYH0 126 aa15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 ACTL6AO96019 429 aa15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 ACAA1P09110 424 aaPredicted RBP15.39■□□□□ 0.05
NOTCH3-201ENST00000263388 IGHV1OR21-1A0A087WYE8 117 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 CXCL3P19876 107 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 TMEM38BQ9NVV0 291 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 CD82P27701 267 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 C9orf62Q8N4C0 152 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 DTD1Q8TEA8 209 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 PAM16Q9Y3D7 125 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 TMIGD3P0DMS9 266 aaPredicted RBP15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 TSPO2Q5TGU0 170 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 RAB1CQ92928 201 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 STAG3L3P0CL85 134 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 ZBTB34Q8NCN2 500 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 GPR61Q9BZJ8 451 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 GNG7O60262 68 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 AMER3Q8N944 861 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 VSTM2LQ96N03 204 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 CHRNA10Q9GZZ6 450 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 PRNDQ9UKY0 176 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 TMEM265A0A087WTH1 108 aa15.38■□□□□ 0.05
NOTCH3-201ENST00000263388 GEMIN2O14893 280 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms